RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 CENPIQ92674 756 aaPredicted RBP14.53□□□□□ -0.08
SNCA-204ENST00000394989 L3MBTL1Q9Y468 752 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 TRPM7Q96QT4 1865 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 LCP1P13796 627 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 STIP1P31948 543 aaKnown RBP14.53□□□□□ -0.08
SNCA-204ENST00000394989 TAF6P49848 677 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 ARL4CP56559 192 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 IGDCC3Q8IVU1 814 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 FBXO36Q8NEA4 188 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 APPL2Q8NEU8 664 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 DYDC1Q8WWB3 177 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 CKAP2Q8WWK9 683 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 FAF2Q96CS3 445 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 ZFP42Q96MM3 310 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 TBCBQ99426 244 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 HEY1Q9Y5J3 304 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 TCP11X1B4DZS4 312 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 PTPN9P43378 593 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 ZNF157P51786 506 aaPredicted RBP14.53□□□□□ -0.08
SNCA-204ENST00000394989 EFHC2Q5JST6 749 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 MAP7D3Q8IWC1 876 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 FUKQ8N0W3 1084 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 PYROXD1Q8WU10 500 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 CCT6BQ92526 530 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 MRRFQ96E11 262 aaKnown RBP14.53□□□□□ -0.08
SNCA-204ENST00000394989 ZNF560Q96MR9 790 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 ELAC2Q9BQ52 826 aaKnown RBP14.53□□□□□ -0.08
SNCA-204ENST00000394989 TACO1Q9BSH4 297 aaKnown RBP14.53□□□□□ -0.08
SNCA-204ENST00000394989 MTMR10Q9NXD2 777 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 CACNG4Q9UBN1 327 aa14.53□□□□□ -0.08
SNCA-204ENST00000394989 CCDC189A1A4V9 331 aa14.52□□□□□ -0.08
SNCA-204ENST00000394989 KIF1CO43896 1103 aaKnown RBP14.52□□□□□ -0.08
SNCA-204ENST00000394989 PNPLA4P41247 253 aa14.52□□□□□ -0.08
SNCA-204ENST00000394989 KCNJ11Q14654 390 aa14.52□□□□□ -0.08
SNCA-204ENST00000394989 PPP6R3Q5H9R7 873 aaPredicted RBP14.52□□□□□ -0.08
SNCA-204ENST00000394989 AGGF1Q8N302 714 aaeCLIP14.52□□□□□ -0.08
SNCA-204ENST00000394989 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.52□□□□□ -0.08
SNCA-204ENST00000394989 AP5M1Q9H0R1 490 aa14.52□□□□□ -0.08
SNCA-204ENST00000394989 Q9Y3F1 56 aa14.52□□□□□ -0.08
SNCA-204ENST00000394989 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.52□□□□□ -0.09
SNCA-204ENST00000394989 DCAF8L1A6NGE4 600 aa14.52□□□□□ -0.09
SNCA-204ENST00000394989 OAS1P00973 400 aaKnown RBP14.52□□□□□ -0.09
SNCA-204ENST00000394989 RBL1P28749 1068 aa14.52□□□□□ -0.09
SNCA-204ENST00000394989 L1CAMP32004 1257 aa14.52□□□□□ -0.09
SNCA-204ENST00000394989 WDR4P57081 412 aaKnown RBP14.52□□□□□ -0.09
SNCA-204ENST00000394989 PREPLQ4J6C6 727 aaPredicted RBP14.52□□□□□ -0.09
SNCA-204ENST00000394989 ADGRF2Q8IZF7 708 aa14.52□□□□□ -0.09
SNCA-204ENST00000394989 CCDC197Q8NCU1 140 aa14.52□□□□□ -0.09
SNCA-204ENST00000394989 TRPV1Q8NER1 839 aa14.52□□□□□ -0.09
SNCA-204ENST00000394989 NDRG1Q92597 394 aaKnown RBP14.52□□□□□ -0.09
SNCA-204ENST00000394989 RTP4Q96DX8 246 aa14.52□□□□□ -0.09
SNCA-204ENST00000394989 ZNF670Q9BS34 389 aa14.52□□□□□ -0.09
SNCA-204ENST00000394989 SNX25Q9H3E2 840 aa14.52□□□□□ -0.09
SNCA-204ENST00000394989 FGFR1OP2Q9NVK5 253 aa14.52□□□□□ -0.09
SNCA-204ENST00000394989 H7C0C1 242 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 APOL1O14791 398 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 SPAG7O75391 227 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 RASSF9O75901 435 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 TGM2P21980 687 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 ATP5OP48047 213 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 AFF1P51825 1210 aaKnown RBP14.51□□□□□ -0.09
SNCA-204ENST00000394989 BCAR1P56945 870 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 DPYSL2Q16555 572 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 C3orf62Q6ZUJ4 267 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 TAX1BP1Q86VP1 789 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 CCDC185Q8N715 623 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 APBA2Q99767 749 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 KATNAL1Q9BW62 490 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 A0A1W2PPM1 405 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 KCNN4O15554 427 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 AVILO75366 819 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 BEST1O76090 585 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 RGS2P41220 211 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 SLC10A2Q12908 348 aaPredicted RBP14.51□□□□□ -0.09
SNCA-204ENST00000394989 BBS9Q3SYG4 887 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 SV2CQ496J9 727 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 KIAA0319Q5VV43 1072 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 TWF2Q6IBS0 349 aaKnown RBP14.51□□□□□ -0.09
SNCA-204ENST00000394989 ARCQ7LC44 396 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 VSIG1Q86XK7 387 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 NME8Q8N427 588 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 ATP11CQ8NB49 1132 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 GSTCDQ8NEC7 633 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 FBF1Q8TES7 1133 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 WNT8BQ93098 351 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 PPP1R10Q96QC0 940 aaKnown RBP14.51□□□□□ -0.09
SNCA-204ENST00000394989 DHRS4Q9BTZ2 278 aa14.51□□□□□ -0.09
SNCA-204ENST00000394989 FAM47DPA6NHR8 397 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 SNX3O60493 162 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 RASA2Q15283 850 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 PAQR9Q6ZVX9 377 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 C4orf33Q8N1A6 199 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 B3GALNT2Q8NCR0 500 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 DENND1AQ8TEH3 1009 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 ACSS3Q9H6R3 686 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 NRDE2Q9H7Z3 1164 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 SLC24A2Q9UI40 661 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 CLDN5O00501 218 aa14.5□□□□□ -0.09
SNCA-204ENST00000394989 XPOTO43592 962 aaKnown RBP14.5□□□□□ -0.09
SNCA-204ENST00000394989 HUS1O60921 280 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms