RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 LRIG3Q6UXM1 1119 aa16.52■□□□□ 0.24
SMARCD1-202ENST00000394963 USP6NLQ92738 828 aa16.52■□□□□ 0.24
SMARCD1-202ENST00000394963 STARD7Q9NQZ5 370 aa16.52■□□□□ 0.24
SMARCD1-202ENST00000394963 ZDHHC18Q9NUE0 388 aa16.52■□□□□ 0.24
SMARCD1-202ENST00000394963 BAIAP2L1Q9UHR4 511 aa16.52■□□□□ 0.24
SMARCD1-202ENST00000394963 CDH16O75309 829 aa16.52■□□□□ 0.24
SMARCD1-202ENST00000394963 PPFIA2O75334 1257 aa16.52■□□□□ 0.24
SMARCD1-202ENST00000394963 ZNF143P52747 638 aaPredicted RBP16.52■□□□□ 0.24
SMARCD1-202ENST00000394963 AUHQ13825 339 aaKnown RBP16.52■□□□□ 0.24
SMARCD1-202ENST00000394963 KDM7AQ6ZMT4 941 aa16.52■□□□□ 0.24
SMARCD1-202ENST00000394963 TRMT10CQ7L0Y3 403 aaKnown RBP16.52■□□□□ 0.24
SMARCD1-202ENST00000394963 CCDC185Q8N715 623 aa16.52■□□□□ 0.24
SMARCD1-202ENST00000394963 WHRNQ9P202 907 aa16.52■□□□□ 0.24
SMARCD1-202ENST00000394963 SMIM35A0A1B0GVV1 85 aa16.52■□□□□ 0.23
SMARCD1-202ENST00000394963 SOAT2O75908 522 aa16.52■□□□□ 0.23
SMARCD1-202ENST00000394963 BEST1O76090 585 aa16.52■□□□□ 0.23
SMARCD1-202ENST00000394963 F2P00734 622 aa16.52■□□□□ 0.23
SMARCD1-202ENST00000394963 EML3Q32P44 896 aa16.52■□□□□ 0.23
SMARCD1-202ENST00000394963 ZNF572Q7Z3I7 529 aaPredicted RBP16.52■□□□□ 0.23
SMARCD1-202ENST00000394963 RNF180Q86T96 592 aa16.52■□□□□ 0.23
SMARCD1-202ENST00000394963 PDCD7Q8N8D1 485 aaKnown RBP16.52■□□□□ 0.23
SMARCD1-202ENST00000394963 ART4Q93070 314 aa16.52■□□□□ 0.23
SMARCD1-202ENST00000394963 SNX27Q96L92 541 aa16.52■□□□□ 0.23
SMARCD1-202ENST00000394963 PRDM5Q9NQX1 630 aaPredicted RBP16.52■□□□□ 0.23
SMARCD1-202ENST00000394963 PRDM4Q9UKN5 801 aa16.52■□□□□ 0.23
SMARCD1-202ENST00000394963 DNALI1O14645 258 aaPredicted RBP16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 PMM2O15305 246 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 CRYBB1P53674 252 aaPredicted RBP16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 SP3Q02447 781 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 QPCTQ16769 361 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 HFE2Q6ZVN8 426 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 TFAP2DQ7Z6R9 452 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 TBC1D1Q86TI0 1168 aaPredicted RBP16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 CYP4X1Q8N118 509 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 OLIG1Q8TAK6 271 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 PEBP4Q96S96 227 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 PLEKHA5Q9HAU0 1116 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 GPR182O15218 404 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 FKBP1BP68106 108 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 IL9RQ01113 521 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 CCDC14Q49A88 953 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 SYPL2Q5VXT5 272 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 TAF2Q6P1X5 1199 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 ATP11CQ8NB49 1132 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 RUBCNQ92622 972 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 WDCPQ9H6R7 721 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 FAM53CQ9NYF3 392 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 SLC27A5Q9Y2P5 690 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 CYP3A5P20815 502 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 ARL1P40616 181 aaPredicted RBP16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 MXRA7P84157 204 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 PPIL6Q8IXY8 311 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 THEM5Q8N1Q8 247 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 DCLK2Q8N568 766 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 SOCS4Q8WXH5 440 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 PPP1R36Q96LQ0 422 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 MORF4L1Q9UBU8 362 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 NENFQ9UMX5 172 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 TRPV2Q9Y5S1 764 aa16.51■□□□□ 0.23
SMARCD1-202ENST00000394963 DNAJB2P25686 324 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 CDC42EP1Q00587 391 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 PTK6Q13882 451 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 ERMARDQ5T6L9 678 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 OVOS1Q6IE37 1185 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 LCLAT1Q6UWP7 414 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 CCHCR1Q8TD31 782 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 FAM136AQ96C01 138 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 RILPQ96NA2 401 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 OSBPL7Q9BZF2 842 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 SFMBT1Q9UHJ3 866 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 FIS1Q9Y3D6 152 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 COL11A1P12107 1806 aaPredicted RBP16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 A0A1W2PPM1 405 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 KBTBD13C9JR72 458 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 FAM155BO75949 473 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 PURAQ00577 322 aaKnown RBP16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 SRLQ86TD4 932 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 EXOC3L1Q86VI1 746 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 SH3TC2Q8TF17 1288 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 PABPC5Q96DU9 382 aaKnown RBP16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 VPS11Q9H270 941 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 KLHL14Q9P2G3 628 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 GREB1LQ9C091 1923 aaPredicted RBP16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 MSI1O43347 362 aaKnown RBP16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 AGTP01019 485 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 ZNF865P0CJ78 1059 aaPredicted RBP16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 ETFBP38117 255 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 OLIG2Q13516 323 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 DDR2Q16832 855 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 TTC31Q49AM3 519 aaPredicted RBP16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 PCGF5Q86SE9 256 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 SCAMP5Q8TAC9 235 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 TBC1D31Q96DN5 1066 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 SEC16BQ96JE7 1060 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 MIOSQ9NXC5 875 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 TRIM17Q9Y577 477 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 SDK1Q7Z5N4 2213 aa16.5■□□□□ 0.23
SMARCD1-202ENST00000394963 ARL5CA6NH57 179 aa16.49■□□□□ 0.23
SMARCD1-202ENST00000394963 ABLIM1O14639 778 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms