RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 FBXO32Q969P5 355 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 NUSAP1Q9BXS6 441 aaKnown RBP6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 LINC00597Q9H2U6 94 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 ITM2CQ9NQX7 267 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 CFAP97Q9P2B7 532 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 R3HCC1Q9Y3T6 440 aaKnown RBP6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 HBS1LQ9Y450 684 aaKnown RBP6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 SYPP08247 313 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 MYL6P60660 151 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 MTA1Q13330 715 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 NCOA4Q13772 614 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 ZRSR1Q15695 479 aaKnown RBP6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 ZNF699Q32M78 642 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 LYSMD4Q5XG99 296 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 C12orf40Q86WS4 652 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 ADAMTS14Q8WXS8 1223 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 JAKMIP2Q96AA8 810 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 ZHX3Q9H4I2 956 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 TMEM8AQ9HCN3 771 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 SCML1Q9UN30 329 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 USP34Q70CQ2 3546 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 TRIOO75962 3097 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 SGK1O00141 431 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 GDF9O60383 454 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 DFNA5O60443 496 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 KLF8O95600 359 aaPredicted RBP6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 CENPBP07199 599 aaPredicted RBP6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 BCKDHBP21953 392 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 PPP1R2P41236 205 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 ASIC1P78348 528 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 TRPC3Q13507 836 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 ST13P5Q8NFI4 369 aaPredicted RBP6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 LMLNQ96KR4 655 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 CYP2S1Q96SQ9 504 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 DUSP16Q9BY84 665 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 DPEP3Q9H4B8 488 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 DNMT3LQ9UJW3 386 aa6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 LSM7Q9UK45 103 aaKnown RBP6.58□□□□□ -1.36
SMARCAD1-203ENST00000394961 VPS37CA5D8V6 355 aaPredicted RBP6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 GOLGA8IPA6NC78 632 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 GOLGA8JA6NMD2 632 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 A8MXQ7 604 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 TULP3O75386 442 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 ATP5C1P36542 298 aaKnown RBP6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 KIF11P52732 1056 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 ORC1Q13415 861 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 FYB2Q5VWT5 728 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 UNQ6494/PRO21346Q6UXR6 183 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 CLEC20AQ6ZU45 233 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 BHLHA9Q7RTU4 235 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 SCN4BQ8IWT1 228 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 GLIS3Q8NEA6 775 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 C1orf216Q8TAB5 229 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 SPATA20Q8TB22 786 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 PAGE5Q96GU1 130 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 ADAM33Q9BZ11 813 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 TRPC7Q9HCX4 862 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 ARHGEF4Q9NR80 690 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 DEC1Q9P2X7 70 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 PCDHA7Q9UN72 937 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 MAGED2Q9UNF1 606 aaPredicted RBP6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 CBFA2T3O75081 653 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 KRT19P08727 400 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 FAM200BP0CF97 657 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 MBL2P11226 248 aaPredicted RBP6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 IDEP14735 1019 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 NUDT1P36639 197 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 PSMC1P62191 440 aaKnown RBP6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 CYP27A1Q02318 531 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 RING1Q06587 406 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 PKDCCQ504Y2 493 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 BTBD8Q5XKL5 378 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 OR6B3Q8NGW1 331 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 NIF3L1Q9GZT8 377 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 PCIF1Q9H4Z3 704 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 SMYD3Q9H7B4 428 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 SH3BP1Q9Y3L3 701 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 FAM186AA6NE01 2351 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 P4HA2O15460 535 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 IRAK2O43187 625 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 NR3C1P04150 777 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 CD59P13987 128 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 CHKAP35790 457 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 SLC6A11P48066 632 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 DPYDQ12882 1025 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 CAMK2GQ13555 558 aaPredicted RBP6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 DHX8Q14562 1220 aaKnown RBP6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 WDR72Q3MJ13 1102 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 LY6G5CQ5SRR4 150 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 CNTN6Q9UQ52 1028 aa6.57□□□□□ -1.36
SMARCAD1-203ENST00000394961 ARHGAP33O14559 1287 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 YKT6O15498 198 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 HCRTO43612 131 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 TNNI1P19237 187 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 YWHAEP62258 255 aaKnown RBP6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 COG7P83436 770 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 ZNF252P-AS1Q0IIN9 211 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 STILQ15468 1287 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 SDHAF4Q5VUM1 108 aa6.56□□□□□ -1.36
SMARCAD1-203ENST00000394961 LSM14AQ8ND56 463 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms