RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CYP4F12Q9HCS2 524 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 FBXL21Q9UKT6 434 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 PIK3C2BO00750 1634 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 TIMM44O43615 452 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 GLRBP48167 497 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 SGCGQ13326 291 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 RD3Q7Z3Z2 195 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 TEX9Q8N6V9 391 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 RXFP2Q8WXD0 754 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 CNPY3Q9BT09 278 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 FBXO44Q9H4M3 255 aa10.71□□□□□ -0.69
COL4A6-203ENST00000394872 hCG_2014768A0A024R1R8 64 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 CXCL11O14625 94 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 JCHAINP01591 159 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 CCDC159P0C7I6 412 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 MSH3P20585 1137 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 GUCA1AP43080 201 aaPredicted RBP10.71□□□□□ -0.7
COL4A6-203ENST00000394872 PTPN11Q06124 597 aaPredicted RBP10.71□□□□□ -0.7
COL4A6-203ENST00000394872 DAB2IPQ5VWQ8 1189 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 FAM83AQ86UY5 434 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 CENPLQ8N0S6 344 aaPredicted RBP10.71□□□□□ -0.7
COL4A6-203ENST00000394872 MIER2Q8N344 545 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 EDEM1Q92611 657 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 NSL1Q96IY1 281 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 PGLYRP2Q96PD5 576 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 PTPRMP28827 1452 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 MGAT4DA6NG13 374 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 SPTLC1O15269 473 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 CPSF4O95639 269 aaKnown RBP10.71□□□□□ -0.7
COL4A6-203ENST00000394872 FGFR2P21802 821 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 PSMA3P25788 255 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 CCR1P32246 355 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 NUDT2P50583 147 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 TRIP10Q15642 601 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 NT5DC3Q86UY8 548 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 CSGALNACT1Q8TDX6 532 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 IL17RAQ96F46 866 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 HMX1Q9NP08 348 aaPredicted RBP10.71□□□□□ -0.7
COL4A6-203ENST00000394872 TBC1D13Q9NVG8 400 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 ABCA9Q8IUA7 1624 aa10.71□□□□□ -0.7
COL4A6-203ENST00000394872 FGFR1P11362 822 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 ALDH5A1P51649 535 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-203ENST00000394872 TBX4P57082 545 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 TGM3Q08188 693 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 WLSQ5T9L3 541 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 ZNF720Q7Z2F6 126 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 LPCAT1Q8NF37 534 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 SERPINB12Q96P63 405 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-203ENST00000394872 GNG14A0A1W2PPG7 69 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 STRNO43815 780 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 STAU1O95793 577 aaKnown RBP10.7□□□□□ -0.7
COL4A6-203ENST00000394872 IL1R1P14778 569 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 NME5P56597 212 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 TBL3Q12788 808 aaKnown RBP10.7□□□□□ -0.7
COL4A6-203ENST00000394872 KBTBD12Q3ZCT8 623 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 CCDC92Q53HC0 331 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-203ENST00000394872 PPM1LQ5SGD2 360 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 SLC30A10Q6XR72 485 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 STRA8Q7Z7C7 330 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 FAR2Q96K12 515 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 CAMKK2Q96RR4 588 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 LSM8O95777 96 aaKnown RBP10.7□□□□□ -0.7
COL4A6-203ENST00000394872 TGFB3P10600 412 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 HALP42357 657 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 CPA2P48052 419 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 PREPLQ4J6C6 727 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-203ENST00000394872 TAS1R2Q8TE23 839 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 SMAD5Q99717 465 aaKnown RBP10.7□□□□□ -0.7
COL4A6-203ENST00000394872 CARD9Q9H257 536 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 PADI4Q9UM07 663 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 SNCAIPQ9Y6H5 919 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 REREQ9P2R6 1566 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 INO80Q9ULG1 1556 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-203ENST00000394872 ACAT1P24752 427 aaKnown RBP10.7□□□□□ -0.7
COL4A6-203ENST00000394872 CYP2F1P24903 491 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 RENBPP51606 427 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 MRPS15P82914 257 aaKnown RBP10.7□□□□□ -0.7
COL4A6-203ENST00000394872 SPOCD1Q6ZMY3 1216 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 MTSS1LQ765P7 747 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.7□□□□□ -0.7
COL4A6-203ENST00000394872 PDLIM2Q96JY6 352 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 VTA1Q9NP79 307 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 UBP1Q9NZI7 540 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 CAB39Q9Y376 341 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-203ENST00000394872 KRT20P35900 424 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 SERPINB5P36952 375 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 PSEN2P49810 448 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 PTAR1Q7Z6K3 402 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-203ENST00000394872 TRIM69Q86WT6 500 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 EMC1Q8N766 993 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 SLC20A1Q8WUM9 679 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 MED8Q96G25 268 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 KIAA1683Q9H0B3 1180 aa10.7□□□□□ -0.7
COL4A6-203ENST00000394872 PSMD12O00232 456 aaPredicted RBP10.69□□□□□ -0.7
COL4A6-203ENST00000394872 COPAP53621 1224 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 ADIGQ0VDE8 80 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 ALFQ53S48 1182 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 ERMARDQ5T6L9 678 aa10.69□□□□□ -0.7
COL4A6-203ENST00000394872 TRMT11Q7Z4G4 463 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms