RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 KBTBD2Q8IY47 623 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 HDAC11Q96DB2 347 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 CCDC97Q96F63 343 aaPredicted RBP9.14□□□□□ -0.95
RTN4-206ENST00000394611 CDRT15Q96T59 188 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 TMEM39BQ9GZU3 492 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 ADNPQ9H2P0 1102 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 DNAAF2Q9NVR5 837 aaKnown RBP9.14□□□□□ -0.95
RTN4-206ENST00000394611 PNPOQ9NVS9 261 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 LMCD1Q9NZU5 365 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 C15orf38-AP3S2A0A0A6YYH1 394 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 RNASEH1O60930 286 aaKnown RBP9.14□□□□□ -0.95
RTN4-206ENST00000394611 CRCPO75575 148 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 ASMTLO95671 621 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 TSPAN8P19075 237 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 PLK1P53350 603 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 SLC45A4Q5BKX6 768 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 ARPINQ7Z6K5 226 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 TMEM35BQ8NCS4 154 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 FEZF2Q8TBJ5 459 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 USP33Q8TEY7 942 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 WDR18Q9BV38 432 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 ZNF341Q9BYN7 854 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 SLC7A8Q9UHI5 535 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 CLEC11AQ9Y240 323 aa9.14□□□□□ -0.95
RTN4-206ENST00000394611 IQCA1LA6NCM1 817 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 TTC36A6NLP5 189 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 GOLGA8CPA6NN73 597 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 CDH15P55291 814 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 NAA20P61599 178 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 KIF19Q2TAC6 998 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 Q4G0T1 1027 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 TRIM50Q86XT4 487 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 UNC45BQ8IWX7 931 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 C10orf82Q8WW14 230 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 INPP5DQ92835 1189 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 POLR3FQ9H1D9 316 aaPredicted RBP9.13□□□□□ -0.95
RTN4-206ENST00000394611 WDR55Q9H6Y2 383 aaPredicted RBP9.13□□□□□ -0.95
RTN4-206ENST00000394611 PARVAQ9NVD7 372 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 BTBD7Q9P203 1132 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 TAGLN3Q9UI15 199 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 AGO2Q9UKV8 859 aaKnown RBP9.13□□□□□ -0.95
RTN4-206ENST00000394611 MRPL11Q9Y3B7 192 aaKnown RBP9.13□□□□□ -0.95
RTN4-206ENST00000394611 SH3BP1Q9Y3L3 701 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 CNTNAP2Q9UHC6 1331 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 NFIBO00712 420 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 MEIS2O14770 477 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 SPATA31D3P0C874 917 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 OSBPP22059 807 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 BPIFB4P59827 614 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 FOLH1Q04609 750 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 FASTKD1Q53R41 847 aaKnown RBP9.13□□□□□ -0.95
RTN4-206ENST00000394611 ZBTB41Q5SVQ8 909 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 SPOCD1Q6ZMY3 1216 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 SPATA31D4Q6ZUB0 917 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 SH3BP5LQ7L8J4 393 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 LDHDQ86WU2 507 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 TMPRSS6Q8IU80 811 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 CDKL2Q92772 493 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 PPP2R3CQ969Q6 453 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 SERAC1Q96JX3 654 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 TUBB6Q9BUF5 446 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 MTMR12Q9C0I1 747 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 ARMC7Q9H6L4 198 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 WDR70Q9NW82 654 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 WRAP73Q9P2S5 460 aaPredicted RBP9.13□□□□□ -0.95
RTN4-206ENST00000394611 PI4KBQ9UBF8 816 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 WDR90Q96KV7 1748 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 UMODL1Q5DID0 1318 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 ZMYM2Q9UBW7 1377 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 C1orf232A0A0U1RR37 186 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 KDM1AO60341 852 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 PROSCO94903 275 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 SNRPAP09012 282 aaKnown RBP9.13□□□□□ -0.95
RTN4-206ENST00000394611 SLC12A2P55011 1212 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 VCPP55072 806 aaKnown RBP9.13□□□□□ -0.95
RTN4-206ENST00000394611 AP3B2Q13367 1082 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 PTPN20Q4JDL3 420 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 DNAL1Q4LDG9 190 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 N4BP2L1Q5TBK1 243 aaPredicted RBP9.13□□□□□ -0.95
RTN4-206ENST00000394611 SNX32Q86XE0 403 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 SENP1Q9P0U3 644 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 IP6K2Q9UHH9 426 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 PCDHB2Q9Y5E7 798 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 CNTNAP1P78357 1384 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 SCN4AP35499 1836 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 KLHL33A6NCF5 533 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 AMHP03971 560 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 LSM3P62310 102 aaKnown RBP9.13□□□□□ -0.95
RTN4-206ENST00000394611 PTK6Q13882 451 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 ZNF699Q32M78 642 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 MSS51Q4VC12 460 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 CMC1Q7Z7K0 106 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 TREML1Q86YW5 311 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 MYO1HQ8N1T3 1032 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 LRRC71Q8N4P6 559 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 CCDC138Q96M89 665 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 IDI2Q9BXS1 227 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 ZNF358Q9NW07 568 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 TJP2Q9UDY2 1190 aa9.13□□□□□ -0.95
RTN4-206ENST00000394611 SOX13Q9UN79 622 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms