RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 GALNT4Q8N4A0 578 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 UNKQ9C0B0 810 aaKnown RBP16.71■□□□□ 0.27
PCDH1-203ENST00000394536 MAGEA13PA6NCF6 341 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 LACTBL1A8MY62 500 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 SMAPO00193 183 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 LYPLA1O75608 230 aaPredicted RBP16.71■□□□□ 0.27
PCDH1-203ENST00000394536 PROCP04070 461 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 CCDC15Q0P6D6 951 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 ITGA9Q13797 1035 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 SH2D4BQ5SQS7 431 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 RINLQ6ZS11 566 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 PPP1R13LQ8WUF5 828 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 ZNF669Q96BR6 464 aaPredicted RBP16.71■□□□□ 0.27
PCDH1-203ENST00000394536 ASCC2Q9H1I8 757 aaPredicted RBP16.71■□□□□ 0.27
PCDH1-203ENST00000394536 CORO1CQ9ULV4 474 aaPredicted RBP16.71■□□□□ 0.27
PCDH1-203ENST00000394536 C2CD2Q9Y426 696 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 SNCAIPQ9Y6H5 919 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 WDR27A2RRH5 827 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 PMM2O15305 246 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 CHRM1P11229 460 aaPredicted RBP16.71■□□□□ 0.27
PCDH1-203ENST00000394536 DSG1Q02413 1049 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 ACSBG2Q5FVE4 666 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 ADGRD1Q6QNK2 874 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 ZPBP2Q6X784 338 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.71■□□□□ 0.27
PCDH1-203ENST00000394536 HACE1Q8IYU2 909 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 ICA1LQ8NDH6 482 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 UCMAQ8WVF2 138 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 WASF2Q9Y6W5 498 aa16.71■□□□□ 0.27
PCDH1-203ENST00000394536 DDX60Q8IY21 1712 aaKnown RBP16.7■□□□□ 0.26
PCDH1-203ENST00000394536 PRR5-ARHGAP8B1AHC4 643 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 PLA2G6O60733 806 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 ERBB2P04626 1255 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 ATP6V1B1P15313 513 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 AMPD1P23109 780 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 ARHGAP8P85298 464 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 ITKQ08881 620 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 CGB2Q6NT52 195 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 FBXO16Q8IX29 292 aaPredicted RBP16.7■□□□□ 0.26
PCDH1-203ENST00000394536 EXOC8Q8IYI6 725 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 USP6NLQ92738 828 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 GGA3Q9NZ52 723 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 ADA2Q9NZK5 511 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 IL1RAPL1Q9NZN1 696 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 MRPL42Q9Y6G3 142 aaKnown RBP16.7■□□□□ 0.26
PCDH1-203ENST00000394536 TTLL13PA6NNM8 815 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 EGFRP00533 1210 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 SERPINB5P36952 375 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 TNFAIP2Q03169 654 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 POU5F1BQ06416 359 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 SEPT6Q14141 434 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 EML3Q32P44 896 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 FSCBQ5H9T9 825 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 IL31Q6EBC2 164 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 JADE1Q6IE81 842 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 KCNT2Q6UVM3 1135 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 PDZD4Q76G19 769 aaPredicted RBP16.7■□□□□ 0.26
PCDH1-203ENST00000394536 ZNF184Q99676 751 aaPredicted RBP16.7■□□□□ 0.26
PCDH1-203ENST00000394536 Q9H521 79 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 CLUHO75153 1309 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 C19orf81C9J6K1 198 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 UGT1A9O60656 530 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 APOEP02649 317 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 VDRP11473 427 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 CYP2F1P24903 491 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 BTKQ06187 659 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 RWDD4Q6NW29 188 aaKnown RBP16.7■□□□□ 0.26
PCDH1-203ENST00000394536 TAS1R3Q7RTX0 852 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 DEFB107AQ8IZN7 70 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 STKLD1Q8NE28 680 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 COPS5Q92905 334 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 SGF29Q96ES7 293 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 UGT1A7Q9HAW7 530 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 UGT1A10Q9HAW8 530 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 UGT1A8Q9HAW9 530 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 PRKAG3Q9UGI9 489 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 STRCP1A6NGW2 1772 aa16.7■□□□□ 0.26
PCDH1-203ENST00000394536 GOLGB1Q14789 3259 aaKnown RBP16.69■□□□□ 0.26
PCDH1-203ENST00000394536 GOLGA8TH3BQL2 631 aa16.69■□□□□ 0.26
PCDH1-203ENST00000394536 KCNK1O00180 336 aa16.69■□□□□ 0.26
PCDH1-203ENST00000394536 TRUB2O95900 331 aaKnown RBP16.69■□□□□ 0.26
PCDH1-203ENST00000394536 CCNB1P14635 433 aa16.69■□□□□ 0.26
PCDH1-203ENST00000394536 MLH1P40692 756 aa16.69■□□□□ 0.26
PCDH1-203ENST00000394536 SERPINB9P50453 376 aa16.69■□□□□ 0.26
PCDH1-203ENST00000394536 RIPOR1Q6ZS17 1223 aa16.69■□□□□ 0.26
PCDH1-203ENST00000394536 RBM15BQ8NDT2 890 aaKnown RBP16.69■□□□□ 0.26
PCDH1-203ENST00000394536 MAN1C1Q9NR34 630 aa16.69■□□□□ 0.26
PCDH1-203ENST00000394536 PDE4DIPQ5VU43 2346 aa16.69■□□□□ 0.26
PCDH1-203ENST00000394536 PAPPAQ13219 1627 aa16.69■□□□□ 0.26
PCDH1-203ENST00000394536 ATRNL1Q5VV63 1379 aa16.69■□□□□ 0.26
PCDH1-203ENST00000394536 DCXO43602 365 aa16.69■□□□□ 0.26
PCDH1-203ENST00000394536 C6orf222P0C671 652 aaPredicted RBP16.69■□□□□ 0.26
PCDH1-203ENST00000394536 GLRBP48167 497 aa16.69■□□□□ 0.26
PCDH1-203ENST00000394536 TCEAL1Q15170 157 aa16.69■□□□□ 0.26
PCDH1-203ENST00000394536 DBN1Q16643 649 aa16.69■□□□□ 0.26
PCDH1-203ENST00000394536 USP33Q8TEY7 942 aa16.69■□□□□ 0.26
PCDH1-203ENST00000394536 ACSS2Q9NR19 701 aa16.69■□□□□ 0.26
PCDH1-203ENST00000394536 DPP3Q9NY33 737 aa16.69■□□□□ 0.26
PCDH1-203ENST00000394536 TDRPQ86YL5 185 aa16.69■□□□□ 0.26
PCDH1-203ENST00000394536 TMA16Q96EY4 203 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms