RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CCDC195A0A1B0GUA6 201 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 CYB561D2O14569 222 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 LPXNO60711 386 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 RNF8O76064 485 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 MT-ND3P03897 115 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 KCNJ11Q14654 390 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 SEPT7Q16181 437 aaKnown RBP14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 MARCH8Q5T0T0 291 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 ILDR2Q71H61 639 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 CLNKQ7Z7G1 428 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 SCUBE3Q8IX30 993 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 CTAGE3PQ8IX95 158 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 UNC5BQ8IZJ1 945 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 MPP5Q8N3R9 675 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 PQLC3Q8N755 202 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 PPM1NQ8N819 430 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 HPDLQ96IR7 371 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 PGLYRP2Q96PD5 576 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 PARK7Q99497 189 aaKnown RBP14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 PLCD4Q9BRC7 762 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 MANSC1Q9H8J5 431 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 KCNK13Q9HB14 408 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 SETD4Q9NVD3 440 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 NOP53Q9NZM5 478 aaKnown RBP14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 ARMCX1Q9P291 453 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 HEY2Q9UBP5 337 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 TSPAN16Q9UKR8 245 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 BRCA2P51587 3418 aa14.04□□□□□ -0.16
GTF2F1-201ENST00000394456 CFAP69A5D8W1 941 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 C2CD4BA6NLJ0 364 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 C1QAP02745 245 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 CCND1P24385 295 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 YWHAZP63104 245 aaKnown RBP14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 NOMO1Q15155 1222 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 KIZQ2M2Z5 673 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 CCDC14Q49A88 953 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 DUSP28Q4G0W2 176 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 PPP1R2P3Q6NXS1 205 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 PMF1Q6P1K2 205 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 SH2D5Q6ZV89 423 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 EMID1Q96A84 441 aaPredicted RBP14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 NFKBIZQ9BYH8 718 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 MIS12Q9H081 205 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 FAM49AQ9H0Q0 323 aaPredicted RBP14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 DENND2DQ9H6A0 471 aaPredicted RBP14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 TEX264Q9Y6I9 313 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 MED7O43513 233 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 F7P08709 466 aaPredicted RBP14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 SERPINB3P29508 390 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 PHBP35232 272 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 GMPRP36959 345 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 FAM110CQ1W6H9 321 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 PPP6R3Q5H9R7 873 aaPredicted RBP14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 MDH1BQ5I0G3 518 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 TRMT10BQ6PF06 316 aaKnown RBP14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 ZNF467Q7Z7K2 595 aaPredicted RBP14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 PLD5Q8N7P1 536 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 FNIP1Q8TF40 1166 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 SENP1Q9P0U3 644 aa14.03□□□□□ -0.16
GTF2F1-201ENST00000394456 FAM237BA0A1B0GVD1 139 aa14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 TRIM49D1C9J1S8 452 aa14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 ZWINTO95229 277 aa14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 GPD1P21695 349 aa14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 ETV4P43268 484 aa14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 CPA2P48052 419 aa14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 ZNF143P52747 638 aaPredicted RBP14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 ANKRD20A2Q5SQ80 823 aa14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 PPP1R26Q5T8A7 1209 aaPredicted RBP14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 ANKRD20A1Q5TYW2 823 aa14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 ANKRD20A3Q5VUR7 823 aa14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 DSTYKQ6XUX3 929 aa14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 CEP128Q6ZU80 1094 aa14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 PCGF5Q86SE9 256 aa14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 ACOT1Q86TX2 421 aa14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 CAND1Q86VP6 1230 aaKnown RBP14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 PCDH19Q8TAB3 1148 aa14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 KHSRPQ92945 711 aaKnown RBP eCLIP14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 MRPL45Q9BRJ2 306 aaKnown RBP14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 ABHD16BQ9H3Z7 469 aa14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 SLC5A4Q9NY91 659 aa14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 TTLL3Q9Y4R7 772 aa14.02□□□□□ -0.16
GTF2F1-201ENST00000394456 DYNC1LI2O43237 492 aaPredicted RBP14.02□□□□□ -0.17
GTF2F1-201ENST00000394456 TSPAN1O60635 241 aa14.02□□□□□ -0.17
GTF2F1-201ENST00000394456 IL18RAPO95256 599 aa14.02□□□□□ -0.17
GTF2F1-201ENST00000394456 APRTP07741 180 aa14.02□□□□□ -0.17
GTF2F1-201ENST00000394456 SKIV2L2P42285 1042 aaKnown RBP14.02□□□□□ -0.17
GTF2F1-201ENST00000394456 NEK3P51956 506 aa14.02□□□□□ -0.17
GTF2F1-201ENST00000394456 SLC18A1P54219 525 aa14.02□□□□□ -0.17
GTF2F1-201ENST00000394456 ZNF200P98182 395 aaPredicted RBP14.02□□□□□ -0.17
GTF2F1-201ENST00000394456 GOLGA7BQ2TAP0 167 aa14.02□□□□□ -0.17
GTF2F1-201ENST00000394456 KLHL38Q2WGJ6 581 aa14.02□□□□□ -0.17
GTF2F1-201ENST00000394456 HSF5Q4G112 596 aaPredicted RBP14.02□□□□□ -0.17
GTF2F1-201ENST00000394456 RFX8Q6ZV50 586 aa14.02□□□□□ -0.17
GTF2F1-201ENST00000394456 ALYREFQ86V81 257 aaKnown RBP14.02□□□□□ -0.17
GTF2F1-201ENST00000394456 TTC30AQ86WT1 665 aa14.02□□□□□ -0.17
GTF2F1-201ENST00000394456 TTC13Q8NBP0 860 aa14.02□□□□□ -0.17
GTF2F1-201ENST00000394456 FBXO27Q8NI29 283 aa14.02□□□□□ -0.17
GTF2F1-201ENST00000394456 RNF157Q96PX1 679 aa14.02□□□□□ -0.17
GTF2F1-201ENST00000394456 SLC13A1Q9BZW2 595 aa14.02□□□□□ -0.17
GTF2F1-201ENST00000394456 HES2Q9Y543 173 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms