RNA–Protein interactions for RNA: ENST00000394310.7

CACNB1-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CACNB1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-203ENST00000394310 CAPN9O14815 690 aa23.06■■□□□ 1.28
CACNB1-203ENST00000394310 TLL1O43897 1013 aa23.06■■□□□ 1.28
CACNB1-203ENST00000394310 RTN3O95197 1032 aaPredicted RBP23.06■■□□□ 1.28
CACNB1-203ENST00000394310 ATF2P15336 505 aa23.06■■□□□ 1.28
CACNB1-203ENST00000394310 CDKN2BP42772 138 aa23.06■■□□□ 1.28
CACNB1-203ENST00000394310 ARSEP51690 589 aa23.06■■□□□ 1.28
CACNB1-203ENST00000394310 DUSP4Q13115 394 aa23.06■■□□□ 1.28
CACNB1-203ENST00000394310 SMC1AQ14683 1233 aaKnown RBP23.06■■□□□ 1.28
CACNB1-203ENST00000394310 SIX1Q15475 284 aaPredicted RBP23.06■■□□□ 1.28
CACNB1-203ENST00000394310 TFDP3Q5H9I0 405 aa23.06■■□□□ 1.28
CACNB1-203ENST00000394310 MON1AQ86VX9 555 aa23.06■■□□□ 1.28
CACNB1-203ENST00000394310 FAM71BQ8TC56 605 aa23.06■■□□□ 1.28
CACNB1-203ENST00000394310 AP1M1Q9BXS5 423 aa23.06■■□□□ 1.28
CACNB1-203ENST00000394310 ZWILCHQ9H900 591 aa23.06■■□□□ 1.28
CACNB1-203ENST00000394310 MRPL17Q9NRX2 175 aaKnown RBP23.06■■□□□ 1.28
CACNB1-203ENST00000394310 ABCC13Q9NSE7 274 aa23.06■■□□□ 1.28
CACNB1-203ENST00000394310 NAALADL1Q9UQQ1 740 aa23.06■■□□□ 1.28
CACNB1-203ENST00000394310 LZTS1Q9Y250 596 aa23.06■■□□□ 1.28
CACNB1-203ENST00000394310 RWDD3Q9Y3V2 267 aa23.06■■□□□ 1.28
CACNB1-203ENST00000394310 NR2E3Q9Y5X4 410 aa23.06■■□□□ 1.28
CACNB1-203ENST00000394310 ZNF487B1APH4 448 aa23.05■■□□□ 1.28
CACNB1-203ENST00000394310 KRT1P04264 644 aa23.05■■□□□ 1.28
CACNB1-203ENST00000394310 TFE3P19532 575 aaPredicted RBP23.05■■□□□ 1.28
CACNB1-203ENST00000394310 KDELR1P24390 212 aa23.05■■□□□ 1.28
CACNB1-203ENST00000394310 ELF2Q15723 593 aa23.05■■□□□ 1.28
CACNB1-203ENST00000394310 OTUD1Q5VV17 481 aaPredicted RBP23.05■■□□□ 1.28
CACNB1-203ENST00000394310 CCDC70Q6NSX1 233 aa23.05■■□□□ 1.28
CACNB1-203ENST00000394310 MFSD7Q6UXD7 560 aa23.05■■□□□ 1.28
CACNB1-203ENST00000394310 SPOCD1Q6ZMY3 1216 aa23.05■■□□□ 1.28
CACNB1-203ENST00000394310 DENND5BQ6ZUT9 1274 aa23.05■■□□□ 1.28
CACNB1-203ENST00000394310 ZDHHC14Q8IZN3 488 aa23.05■■□□□ 1.28
CACNB1-203ENST00000394310 TTC9BQ8N6N2 239 aa23.05■■□□□ 1.28
CACNB1-203ENST00000394310 ZBP1Q9H171 429 aa23.05■■□□□ 1.28
CACNB1-203ENST00000394310 SLITRK6Q9H5Y7 841 aa23.05■■□□□ 1.28
CACNB1-203ENST00000394310 ANKZF1Q9H8Y5 726 aa23.05■■□□□ 1.28
CACNB1-203ENST00000394310 NR2E1Q9Y466 385 aa23.05■■□□□ 1.28
CACNB1-203ENST00000394310 F9P00740 461 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 CTSAP10619 480 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 RALAP11233 206 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 NCAM1P13591 858 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 BMPR1AP36894 532 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 AIF1P55008 147 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 PDK2Q15119 407 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 MGAT5BQ3V5L5 792 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 RAB6CQ53S08 254 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 ODF2Q5BJF6 829 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 KCNT1Q5JUK3 1230 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 ERMARDQ5T6L9 678 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 CCDC50Q8IVM0 306 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 ARHGAP18Q8N392 663 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 PRELID2Q8N945 189 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 C12orf50Q8NA57 414 aaPredicted RBP23.04■■□□□ 1.28
CACNB1-203ENST00000394310 RUBCNQ92622 972 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 RNF25Q96BH1 459 aaPredicted RBP23.04■■□□□ 1.28
CACNB1-203ENST00000394310 RAB6CQ9H0N0 254 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 HOMER3Q9NSC5 361 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.04■■□□□ 1.28
CACNB1-203ENST00000394310 SLC27A5Q9Y2P5 690 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 TJP3O95049 919 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 RPL17P18621 184 aaKnown RBP23.04■■□□□ 1.28
CACNB1-203ENST00000394310 RDXP35241 583 aaKnown RBP23.04■■□□□ 1.28
CACNB1-203ENST00000394310 GJC1P36383 396 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 SULT1E1P49888 294 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 YWHAGP61981 247 aaKnown RBP eCLIP23.04■■□□□ 1.28
CACNB1-203ENST00000394310 EIF4EBP2Q13542 120 aaPredicted RBP23.04■■□□□ 1.28
CACNB1-203ENST00000394310 ANKS1BQ7Z6G8 1248 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 TNS4Q8IZW8 715 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 KCTD6Q8NC69 237 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 LRRC19Q9H756 370 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 CALCOCO1Q9P1Z2 691 aa23.04■■□□□ 1.28
CACNB1-203ENST00000394310 hCG_1818297A0A087WSY0 165 aa23.03■■□□□ 1.28
CACNB1-203ENST00000394310 LRRD1A4D1F6 860 aa23.03■■□□□ 1.28
CACNB1-203ENST00000394310 M0QYT0 321 aa23.03■■□□□ 1.28
CACNB1-203ENST00000394310 C2CD2LO14523 706 aa23.03■■□□□ 1.28
CACNB1-203ENST00000394310 SMTNL2Q2TAL5 461 aa23.03■■□□□ 1.28
CACNB1-203ENST00000394310 ZFYVE27Q5T4F4 411 aa23.03■■□□□ 1.28
CACNB1-203ENST00000394310 SCD5Q86SK9 330 aa23.03■■□□□ 1.28
CACNB1-203ENST00000394310 MAP7D3Q8IWC1 876 aa23.03■■□□□ 1.28
CACNB1-203ENST00000394310 KLHL23Q8NBE8 558 aa23.03■■□□□ 1.28
CACNB1-203ENST00000394310 LRRC1Q9BTT6 524 aa23.03■■□□□ 1.28
CACNB1-203ENST00000394310 TTLL2Q9BWV7 592 aa23.03■■□□□ 1.28
CACNB1-203ENST00000394310 IRAK3Q9Y616 596 aa23.03■■□□□ 1.28
CACNB1-203ENST00000394310 PLXNA3P51805 1871 aa23.03■■□□□ 1.28
CACNB1-203ENST00000394310 TCRBV7S2A1N4TA0A589 114 aa23.02■■□□□ 1.28
CACNB1-203ENST00000394310 IGLV3-25P01717 112 aa23.02■■□□□ 1.28
CACNB1-203ENST00000394310 YWHAQP27348 245 aa23.02■■□□□ 1.28
CACNB1-203ENST00000394310 CHRNA3P32297 505 aa23.02■■□□□ 1.28
CACNB1-203ENST00000394310 GPR15P49685 360 aa23.02■■□□□ 1.28
CACNB1-203ENST00000394310 PSEN1P49768 467 aa23.02■■□□□ 1.28
CACNB1-203ENST00000394310 DPYSL2Q16555 572 aa23.02■■□□□ 1.28
CACNB1-203ENST00000394310 SCYL2Q6P3W7 929 aa23.02■■□□□ 1.28
CACNB1-203ENST00000394310 TSC1Q92574 1164 aa23.02■■□□□ 1.28
CACNB1-203ENST00000394310 RUNDC3BQ96NL0 473 aa23.02■■□□□ 1.28
CACNB1-203ENST00000394310 KRT12Q99456 494 aa23.02■■□□□ 1.28
CACNB1-203ENST00000394310 SEPT5Q99719 369 aaPredicted RBP23.02■■□□□ 1.28
CACNB1-203ENST00000394310 HERPUD2Q9BSE4 406 aa23.02■■□□□ 1.28
CACNB1-203ENST00000394310 RAB21Q9UL25 225 aa23.02■■□□□ 1.28
CACNB1-203ENST00000394310 C5orf67F2Z3F1 127 aa23.01■■□□□ 1.27
CACNB1-203ENST00000394310 PI4K2BG5E9Z4 385 aa23.01■■□□□ 1.27
CACNB1-203ENST00000394310 PHF2O75151 1096 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms