RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 NACA2Q9H009 215 aa18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 CYP3A43Q9HB55 503 aa18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 BCCIPQ9P287 314 aaKnown RBP eCLIP18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 WDR35Q9P2L0 1181 aa18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 PCDHA5Q9Y5H7 936 aa18.48■□□□□ 0.55
SNRPA1-202ENST00000394082 TNRC6BQ9UPQ9 1833 aaKnown RBP18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 MYO18AQ92614 2054 aaKnown RBP18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 MAP3K13O43283 966 aa18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 HSP90AA1P07900 732 aaKnown RBP18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 FAM200BP0CF97 657 aa18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 CCDC130P13994 396 aa18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 NTSR1P30989 418 aa18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 ATP5C1P36542 298 aaKnown RBP18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 MAP3K7CLP57077 242 aa18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 KDSRQ06136 332 aa18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 FOXD4L5Q5VV16 416 aaPredicted RBP18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 SLC23A3Q6PIS1 610 aa18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 SLC36A4Q6YBV0 504 aa18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 HSCBQ8IWL3 235 aa18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 HMGB4Q8WW32 186 aa18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 FOXD4L4Q8WXT5 416 aaPredicted RBP18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 PIGKQ92643 395 aa18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 NUSAP1Q9BXS6 441 aaKnown RBP18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 DNAI2Q9GZS0 605 aa18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 MBD1Q9UIS9 605 aaPredicted RBP18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 HPSEQ9Y251 543 aa18.47■□□□□ 0.55
SNRPA1-202ENST00000394082 TCRBV21S2A2A0A5A6 115 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 PATE3B3GLJ2 98 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 HHLA1C9JL84 531 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 AP5Z1O43299 807 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 CALUO43852 315 aaPredicted RBP18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 CLSTN1O94985 981 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 PSEN1P49768 467 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 DNM1Q05193 864 aaKnown RBP18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 ANO4Q32M45 955 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 FOXD4L6Q3SYB3 417 aaPredicted RBP18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 C1orf220Q5T0J3 134 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 SH3PXD2AQ5TCZ1 1133 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 FOXD4L3Q6VB84 417 aaPredicted RBP18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 CLEC20AQ6ZU45 233 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 INTS8Q75QN2 995 aaKnown RBP18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 TTC30AQ86WT1 665 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 NAT16Q8N8M0 369 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 C12orf29Q8N999 325 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 CEP76Q8TAP6 659 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 RLN3Q8WXF3 142 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 XPO6Q96QU8 1125 aaKnown RBP18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 IMPG2Q9BZV3 1241 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.46■□□□□ 0.553e-8■■■■■ 45.9
SNRPA1-202ENST00000394082 HMGXB4Q9UGU5 601 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 LSM7Q9UK45 103 aaKnown RBP18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 PILRBQ9UKJ0 227 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 WASF3Q9UPY6 502 aa18.46■□□□□ 0.55
SNRPA1-202ENST00000394082 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 FAM237AA0A1B0GTK4 181 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 UPK3BL1B0FP48 263 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 UPK3BL2E5RIL1 263 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 ZNF217O75362 1048 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 RHOBTB3O94955 611 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 HLA-DRAP01903 254 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 PFKFB1P16118 471 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 PIK3CAP42336 1068 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 PTGER3P43115 390 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 PGFP49763 221 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 VAMP7P51809 220 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 TRIM61Q5EBN2 209 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 C10orf76Q5T2E6 689 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 LYSMD4Q5XG99 296 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 CEP135Q66GS9 1140 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 GRAMD4Q6IC98 578 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 RABEPKQ7Z6M1 372 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 TADA2BQ86TJ2 420 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 TMEFF1Q8IYR6 380 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 WBP2Q969T9 261 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 CYFIP2Q96F07 1278 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 NT5C1AQ9BXI3 368 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 FAM124BQ9H5Z6 455 aaPredicted RBP18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 CD248Q9HCU0 757 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 HCN2Q9UL51 889 aa18.45■□□□□ 0.54
SNRPA1-202ENST00000394082 A0A1W2PQF6 199 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 GFRA2O00451 464 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 ZBTB24O43167 697 aaPredicted RBP18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 PROS1P07225 676 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 HOXB2P14652 356 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 TYRP14679 529 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 GABRG2P18507 467 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 PLA2G4AP47712 749 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 PKP1Q13835 747 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 SDE2Q6IQ49 451 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 CCDC186Q7Z3E2 898 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 PGBD3Q8N328 593 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 TTC39CQ8N584 583 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 CCDC47Q96A33 483 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 CDK5RAP1Q96SZ6 601 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 GABRG3Q99928 467 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 BBS2Q9BXC9 721 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 FAM49BQ9NUQ9 324 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 TMEM74BQ9NUR3 256 aa18.44■□□□□ 0.54
SNRPA1-202ENST00000394082 DNAJC17Q9NVM6 304 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms