RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 TAS1R1Q7RTX1 841 aa20.52■□□□□ 0.88
RAB5C-202ENST00000393860 EDEM1Q92611 657 aa20.52■□□□□ 0.88
RAB5C-202ENST00000393860 SLC2A13Q96QE2 648 aa20.52■□□□□ 0.88
RAB5C-202ENST00000393860 C10orf88Q9H8K7 445 aa20.52■□□□□ 0.88
RAB5C-202ENST00000393860 POPDC2Q9HBU9 364 aa20.52■□□□□ 0.88
RAB5C-202ENST00000393860 PCDH18Q9HCL0 1135 aa20.52■□□□□ 0.88
RAB5C-202ENST00000393860 TMPRSS4Q9NRS4 437 aa20.52■□□□□ 0.88
RAB5C-202ENST00000393860 GRHL1Q9NZI5 618 aa20.52■□□□□ 0.88
RAB5C-202ENST00000393860 PATJQ8NI35 1801 aa20.52■□□□□ 0.88
RAB5C-202ENST00000393860 M0QYT0 321 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 CAPN9O14815 690 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 CAPN15O75808 1086 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 CSF2RAP15509 400 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 NOS2P35228 1153 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 GPR15P49685 360 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 OTUD4Q01804 1114 aaKnown RBP20.51■□□□□ 0.87
RAB5C-202ENST00000393860 BOLA3Q53S33 107 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 NPNTQ6UXI9 565 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 BBS12Q6ZW61 710 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 ATL2Q8NHH9 583 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 DHX35Q9H5Z1 703 aaKnown RBP20.51■□□□□ 0.87
RAB5C-202ENST00000393860 HOMER3Q9NSC5 361 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 FAM53CQ9NYF3 392 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 ASIC3Q9UHC3 531 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 SF3B1O75533 1304 aaKnown RBP eCLIP20.51■□□□□ 0.878e-6■■■■■ 107
RAB5C-202ENST00000393860 LTFP02788 710 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 PECAM1P16284 738 aaPredicted RBP20.51■□□□□ 0.87
RAB5C-202ENST00000393860 PLTPP55058 493 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 RTP2Q5QGT7 225 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 ERMARDQ5T6L9 678 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 ZDHHC24Q6UX98 284 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 GSTA5Q7RTV2 222 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 DCP1BQ8IZD4 617 aaKnown RBP20.51■□□□□ 0.87
RAB5C-202ENST00000393860 SLC7A14Q8TBB6 771 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 ACTL9Q8TC94 416 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 GRK7Q8WTQ7 553 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 TEKT4Q8WW24 435 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 SLCO2A1Q92959 643 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 NPY6RQ99463 290 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 TMEM175Q9BSA9 504 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 UBXN6Q9BZV1 441 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 AP4E1Q9UPM8 1137 aa20.51■□□□□ 0.87
RAB5C-202ENST00000393860 COL4A6Q14031 1691 aa20.5■□□□□ 0.87
RAB5C-202ENST00000393860 ENDOD1O94919 500 aa20.5■□□□□ 0.87
RAB5C-202ENST00000393860 ACRP10323 421 aa20.5■□□□□ 0.87
RAB5C-202ENST00000393860 NCAM1P13591 858 aa20.5■□□□□ 0.87
RAB5C-202ENST00000393860 FGFR3P22607 806 aa20.5■□□□□ 0.87
RAB5C-202ENST00000393860 FAM193AP78312 1265 aa20.5■□□□□ 0.87
RAB5C-202ENST00000393860 DEFB103AP81534 67 aa20.5■□□□□ 0.87
RAB5C-202ENST00000393860 BYSLQ13895 437 aaKnown RBP20.5■□□□□ 0.87
RAB5C-202ENST00000393860 PKN2Q16513 984 aaKnown RBP20.5■□□□□ 0.87
RAB5C-202ENST00000393860 ZNF280DQ6N043 979 aa20.5■□□□□ 0.87
RAB5C-202ENST00000393860 B4GALNT4Q76KP1 1039 aa20.5■□□□□ 0.87
RAB5C-202ENST00000393860 STRADAQ7RTN6 431 aa20.5■□□□□ 0.87
RAB5C-202ENST00000393860 PYROXD2Q8N2H3 581 aa20.5■□□□□ 0.87
RAB5C-202ENST00000393860 TTC9BQ8N6N2 239 aa20.5■□□□□ 0.87
RAB5C-202ENST00000393860 MAK16Q9BXY0 300 aaKnown RBP20.5■□□□□ 0.87
RAB5C-202ENST00000393860 ZDHHC18Q9NUE0 388 aa20.5■□□□□ 0.87
RAB5C-202ENST00000393860 OGFRQ9NZT2 677 aa20.5■□□□□ 0.87
RAB5C-202ENST00000393860 STAP1Q9ULZ2 295 aa20.5■□□□□ 0.87
RAB5C-202ENST00000393860 ZNF148Q9UQR1 794 aa20.5■□□□□ 0.87
RAB5C-202ENST00000393860 GAS8O95995 478 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 HSPA1AP0DMV8 641 aaKnown RBP20.49■□□□□ 0.87
RAB5C-202ENST00000393860 HSPA1BP0DMV9 641 aaKnown RBP20.49■□□□□ 0.87
RAB5C-202ENST00000393860 IL4RP24394 825 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 SLC5A3P53794 718 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 PTK6Q13882 451 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 RSPO2Q6UXX9 243 aaPredicted RBP20.49■□□□□ 0.87
RAB5C-202ENST00000393860 GLIS1Q8NBF1 620 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 KCTD15Q96SI1 283 aaPredicted RBP20.49■□□□□ 0.87
RAB5C-202ENST00000393860 PIGVQ9NUD9 493 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 MDM4O15151 490 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 SOAT2O75908 522 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 DGKIO75912 1065 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 ETS1P14921 441 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 DEUP1Q05D60 604 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 NNTQ13423 1086 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 MRPL58Q14197 206 aaKnown RBP20.49■□□□□ 0.87
RAB5C-202ENST00000393860 DDR2Q16832 855 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 C1orf228Q6PIY5 440 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 PRSS55Q6UWB4 352 aaPredicted RBP20.49■□□□□ 0.87
RAB5C-202ENST00000393860 NECAB2Q7Z6G3 386 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 FBXO25Q8TCJ0 367 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 NCAPGQ9BPX3 1015 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 EFR3BQ9Y2G0 817 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 LTBP2Q14767 1821 aa20.49■□□□□ 0.87
RAB5C-202ENST00000393860 KIAA0100Q14667 2235 aaKnown RBP20.48■□□□□ 0.87
RAB5C-202ENST00000393860 MYO16Q9Y6X6 1858 aa20.48■□□□□ 0.87
RAB5C-202ENST00000393860 TIMP1P01033 207 aa20.48■□□□□ 0.87
RAB5C-202ENST00000393860 ZSCAN5DPP0CG00 497 aa20.48■□□□□ 0.87
RAB5C-202ENST00000393860 CPB1P15086 417 aa20.48■□□□□ 0.87
RAB5C-202ENST00000393860 RAG1P15918 1043 aa20.48■□□□□ 0.87
RAB5C-202ENST00000393860 L1CAMP32004 1257 aa20.48■□□□□ 0.87
RAB5C-202ENST00000393860 RDXP35241 583 aaKnown RBP20.48■□□□□ 0.87
RAB5C-202ENST00000393860 VCPP55072 806 aaKnown RBP20.48■□□□□ 0.87
RAB5C-202ENST00000393860 PDK2Q15119 407 aa20.48■□□□□ 0.87
RAB5C-202ENST00000393860 ANKRD20A8PQ5CZ79 823 aa20.48■□□□□ 0.87
RAB5C-202ENST00000393860 ZNF365Q70YC5 407 aa20.48■□□□□ 0.87
RAB5C-202ENST00000393860 MAP7D3Q8IWC1 876 aa20.48■□□□□ 0.87
RAB5C-202ENST00000393860 EIF1ADQ8N9N8 165 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms