RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 CYP4A22Q5TCH4 519 aa13.9□□□□□ -0.18
USP44-202ENST00000393091 HS6ST3Q8IZP7 471 aa13.9□□□□□ -0.18
USP44-202ENST00000393091 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.9□□□□□ -0.18
USP44-202ENST00000393091 LUC7LQ9NQ29 371 aaKnown RBP13.9□□□□□ -0.18
USP44-202ENST00000393091 ARHGAP26Q9UNA1 814 aa13.9□□□□□ -0.18
USP44-202ENST00000393091 LOC730098B7Z3J9 87 aa13.9□□□□□ -0.18
USP44-202ENST00000393091 H2AFZP0C0S5 128 aa13.9□□□□□ -0.18
USP44-202ENST00000393091 FSHRP23945 695 aa13.9□□□□□ -0.18
USP44-202ENST00000393091 AIF1P55008 147 aa13.9□□□□□ -0.18
USP44-202ENST00000393091 USP4Q13107 963 aa13.9□□□□□ -0.18
USP44-202ENST00000393091 OTUD1Q5VV17 481 aaPredicted RBP13.9□□□□□ -0.18
USP44-202ENST00000393091 MMS22LQ6ZRQ5 1243 aa13.9□□□□□ -0.18
USP44-202ENST00000393091 H2AFVQ71UI9 128 aa13.9□□□□□ -0.18
USP44-202ENST00000393091 PDZD4Q76G19 769 aaPredicted RBP13.9□□□□□ -0.18
USP44-202ENST00000393091 DDX42Q86XP3 938 aaKnown RBP eCLIP13.9□□□□□ -0.18
USP44-202ENST00000393091 RHOT2Q8IXI1 618 aa13.9□□□□□ -0.18
USP44-202ENST00000393091 KLF16Q9BXK1 252 aaPredicted RBP13.9□□□□□ -0.18
USP44-202ENST00000393091 IGFLR1Q9H665 355 aa13.9□□□□□ -0.18
USP44-202ENST00000393091 RETREG1Q9H6L5 497 aa13.9□□□□□ -0.18
USP44-202ENST00000393091 NMUR1Q9HB89 426 aa13.9□□□□□ -0.18
USP44-202ENST00000393091 GMIPQ9P107 970 aa13.9□□□□□ -0.18
USP44-202ENST00000393091 FAM50BQ9Y247 325 aa13.9□□□□□ -0.18
USP44-202ENST00000393091 USP15Q9Y4E8 981 aaPredicted RBP13.9□□□□□ -0.18
USP44-202ENST00000393091 YJEFN3A6XGL0 299 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 E7ENQ6 273 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 GFRA2O00451 464 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 GREM1O60565 184 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 ARHGAP15Q53QZ3 475 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 CCDC122Q5T0U0 273 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 POTEHQ6S545 545 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 PASD1Q8IV76 773 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 ATXN2LQ8WWM7 1075 aaKnown RBP13.89□□□□□ -0.19
USP44-202ENST00000393091 SLC39A13Q96H72 371 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 KCNF1Q9H3M0 494 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 CDH7Q9ULB5 785 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 PCDHA13Q9Y5I0 950 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 SOWAHDA6NJG2 315 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 USP17L7P0C7H9 530 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 CA8P35219 290 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 VAV2P52735 878 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 GALCP54803 685 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 NRG1Q02297 640 aaPredicted RBP13.89□□□□□ -0.19
USP44-202ENST00000393091 TRIP4Q15650 581 aaPredicted RBP13.89□□□□□ -0.19
USP44-202ENST00000393091 SLC25A52Q3SY17 297 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 STRADAQ7RTN6 431 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 SPC24Q8NBT2 197 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 TJP2Q9UDY2 1190 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 TRIOBPQ9H2D6 2365 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 A0A1W2PQH9 124 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 NRG2O14511 850 aaPredicted RBP13.89□□□□□ -0.19
USP44-202ENST00000393091 RALAP11233 206 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 FCARP24071 287 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 MLLT6P55198 1093 aaPredicted RBP13.89□□□□□ -0.19
USP44-202ENST00000393091 HECTD3Q5T447 861 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 BSPRYQ5W0U4 402 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 GRASPQ7Z6J2 395 aaPredicted RBP13.89□□□□□ -0.19
USP44-202ENST00000393091 PLD4Q96BZ4 506 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 GCNAQ96QF7 691 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 HCFC1R1Q9NWW0 138 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 ADGRG1Q9Y653 693 aa13.89□□□□□ -0.19
USP44-202ENST00000393091 CHD5Q8TDI0 1954 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 ECI2O75521 394 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 ZNF143P52747 638 aaPredicted RBP13.88□□□□□ -0.19
USP44-202ENST00000393091 SDHAF4Q5VUM1 108 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 SCUBE3Q8IX30 993 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 NPAS3Q8IXF0 933 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 ELSPBP1Q96BH3 223 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 TRPV5Q9NQA5 729 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 TLR6Q9Y2C9 796 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 AKR1B10O60218 316 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 PGFP49763 221 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 RGS7P49802 495 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 ARTNQ5T4W7 220 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 TRNP1Q6NT89 227 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 Q6ZNB5 142 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 PSTKQ8IV42 348 aaKnown RBP13.88□□□□□ -0.19
USP44-202ENST00000393091 FAM71BQ8TC56 605 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 RFFLQ8WZ73 363 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 CORO1BQ9BR76 489 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 PHF7Q9BWX1 381 aaPredicted RBP13.88□□□□□ -0.19
USP44-202ENST00000393091 PDCL3Q9H2J4 239 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 NR2E1Q9Y466 385 aa13.88□□□□□ -0.19
USP44-202ENST00000393091 LCP1P13796 627 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 GABRR2P28476 465 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 AAK1Q2M2I8 961 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 C5orf22Q49AR2 442 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 CMTM8Q8IZV2 173 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 RNF10Q8N5U6 811 aaKnown RBP13.87□□□□□ -0.19
USP44-202ENST00000393091 FEZF2Q8TBJ5 459 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 ADAMTS19Q8TE59 1207 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 CLEC4CQ8WTT0 213 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 MRPS31Q92665 395 aaKnown RBP13.87□□□□□ -0.19
USP44-202ENST00000393091 FAM161BQ96MY7 647 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 TSGA10Q9BZW7 698 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 ARHGEF38Q9NXL2 777 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 ZNF510Q9Y2H8 683 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 DOCK4Q8N1I0 1966 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 F9P00740 461 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 RARGP13631 454 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 CEBPBP17676 345 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms