RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 SHISA3A0PJX4 238 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 LRRIQ4A6NIV6 560 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 RBAK-RBAKDNI3L0D1 243 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 IFIT3O14879 490 aaKnown RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 ZWINTO95229 277 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 BCL10O95999 233 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 PRKCBP05771 671 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 GJB1P08034 283 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 CD86P42081 329 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 PCP4P48539 62 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 PEX5P50542 639 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 AFF1P51825 1210 aaKnown RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 ADAM15Q13444 863 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 CUL2Q13617 745 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 RAB39AQ14964 217 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 SYT16Q17RD7 645 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 ANKRD20A4Q4UJ75 823 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 ANKRD20A8PQ5CZ79 823 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 ANKRD20A2Q5SQ80 823 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 ANKRD20A1Q5TYW2 823 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 ANKRD20A3Q5VUR7 823 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 MAML2Q8IZL2 1156 aaPredicted RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 FBXL6Q8N531 539 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 DNAAF1Q8NEP3 725 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 FNIP1Q8TF40 1166 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 FBLIM1Q8WUP2 373 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 ANKRD49Q8WVL7 239 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 MAML1Q92585 1016 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 SOX17Q9H6I2 414 aaPredicted RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 PLEKHA2Q9HB19 425 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 LPAR3Q9UBY5 353 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 PCSK1NQ9UHG2 260 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 DUSP13Q9UII6 198 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 GDF2Q9UK05 429 aaPredicted RBP3.74□□□□□ -1.81
XRN1-202ENST00000392981 USP22Q9UPT9 525 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 TELO2Q9Y4R8 837 aa3.74□□□□□ -1.81
XRN1-202ENST00000392981 A8MVJ9 347 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 RNF225M0QZC1 329 aaPredicted RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 BCAS2O75934 225 aaPredicted RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 SCG5P05408 212 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 CYP2A6P11509 494 aaPredicted RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 ADH5P11766 374 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 VAV1P15498 845 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 CD72P21854 359 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 SEC24CP53992 1094 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 SF3A3Q12874 501 aaKnown RBP eCLIP3.73□□□□□ -1.81
XRN1-202ENST00000392981 PHF19Q5T6S3 580 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 MCTP1Q6DN14 999 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 USP51Q70EK9 711 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 CILP2Q8IUL8 1156 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 C11orf44Q8N8P7 122 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 GSDMAQ96QA5 445 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 THUMPD2Q9BTF0 503 aaKnown RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 IMPG2Q9BZV3 1241 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 ANKRD2Q9GZV1 360 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 STN1Q9H668 368 aaKnown RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 KIF9Q9HAQ2 790 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 FBRSL1Q9HCM7 1045 aaKnown RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 RRAGDQ9NQL2 400 aaPredicted RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 PAG1Q9NWQ8 432 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 KCNK7Q9Y2U2 307 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 PCDHA10Q9Y5I2 948 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 FAM187AA6NFU0 413 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 PRDM1O75626 825 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 CER1O95813 267 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 NTRK1P04629 796 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 EDNRBP24530 442 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 MC5RP33032 325 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 USP8P40818 1118 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 GALCP54803 685 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 NSUN2Q08J23 767 aaKnown RBP eCLIP3.73□□□□□ -1.81
XRN1-202ENST00000392981 EPS8Q12929 822 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 NPRL3Q12980 569 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 PLD1Q13393 1074 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 TNFAIP1Q13829 316 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 PDK1Q15118 436 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 TCP11X2Q5H9J9 407 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 ADALQ6DHV7 355 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 SLC2A7Q6PXP3 512 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 PRPF39Q86UA1 669 aaKnown RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 VPS52Q8N1B4 723 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 SP7Q8TDD2 431 aaPredicted RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 KLHL29Q96CT2 875 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 GTPBP2Q9BX10 602 aaKnown RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 AGXT2Q9BYV1 514 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 NACAP1Q9BZK3 213 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 DNAJB9Q9UBS3 223 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 USP21Q9UK80 565 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 ADGRF5Q8IZF2 1346 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 DENND3A2RUS2 1198 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 PIK3R2O00459 728 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 TK1P04183 234 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 HSPA5P11021 654 aaKnown RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 CTPS1P17812 591 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 CCNCP24863 283 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 CST5P28325 142 aaPredicted RBP3.73□□□□□ -1.81
XRN1-202ENST00000392981 GJA4P35212 333 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 SOAT1P35610 550 aa3.73□□□□□ -1.81
XRN1-202ENST00000392981 RGS2P41220 211 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms