RNA–Protein interactions for RNA: ENST00000392129.10

TMCO1-202, Transcript of transmembrane and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO1, Length 1,946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-202ENST00000392129 LMNB2Q03252 620 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 PTK6Q13882 451 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 KRT81Q14533 505 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 CA9Q16790 459 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 SLC39A12Q504Y0 691 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 BHLHA9Q7RTU4 235 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 VSIG1Q86XK7 387 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 CEP57Q86XR8 500 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 SCML4Q8N228 414 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 MREGQ8N565 214 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 TSEN2Q8NCE0 465 aaKnown RBP12.78□□□□□ -0.36
TMCO1-202ENST00000392129 SLC35B2Q8TB61 432 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 IRGQQ8WZA9 623 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 NKD2Q969F2 451 aaPredicted RBP12.78□□□□□ -0.36
TMCO1-202ENST00000392129 HAUS1Q96CS2 278 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 MAK16Q9BXY0 300 aaKnown RBP12.78□□□□□ -0.36
TMCO1-202ENST00000392129 FRMD8P1Q9BZ68 369 aaPredicted RBP12.78□□□□□ -0.36
TMCO1-202ENST00000392129 PCDH18Q9HCL0 1135 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 SAE1Q9UBE0 346 aaPredicted RBP12.78□□□□□ -0.36
TMCO1-202ENST00000392129 STAP1Q9ULZ2 295 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 NAALADL1Q9UQQ1 740 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 USP3Q9Y6I4 520 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 TANC1Q9C0D5 1861 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 SF3B1O75533 1304 aaKnown RBP eCLIP12.78□□□□□ -0.363e-6■■■■■ 137.9
TMCO1-202ENST00000392129 NT5C1B-RDH14C9J2C7 533 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 CAPN9O14815 690 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 UPP2O95045 317 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 LTFP02788 710 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 LBX1P52954 281 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 PLTPP55058 493 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 VCPP55072 806 aaKnown RBP12.78□□□□□ -0.36
TMCO1-202ENST00000392129 PITX1P78337 314 aaPredicted RBP12.78□□□□□ -0.36
TMCO1-202ENST00000392129 OASLQ15646 514 aaKnown RBP12.78□□□□□ -0.36
TMCO1-202ENST00000392129 NFE2Q16621 373 aaPredicted RBP12.78□□□□□ -0.36
TMCO1-202ENST00000392129 OTUD1Q5VV17 481 aaPredicted RBP12.78□□□□□ -0.36
TMCO1-202ENST00000392129 FUT10Q6P4F1 479 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 ZDHHC24Q6UX98 284 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 LRRC43Q8N309 656 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 FAM71BQ8TC56 605 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 ACTL9Q8TC94 416 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 FBXO25Q8TCJ0 367 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 RNF157Q96PX1 679 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 ACBD3Q9H3P7 528 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 ASIC3Q9UHC3 531 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 ZNF148Q9UQR1 794 aa12.78□□□□□ -0.36
TMCO1-202ENST00000392129 APOC4-APOC2K7ER74 178 aa12.77□□□□□ -0.37
TMCO1-202ENST00000392129 M0QYT0 321 aa12.77□□□□□ -0.37
TMCO1-202ENST00000392129 APOC2P02655 101 aa12.77□□□□□ -0.37
TMCO1-202ENST00000392129 IVDP26440 423 aa12.77□□□□□ -0.37
TMCO1-202ENST00000392129 L1CAMP32004 1257 aa12.77□□□□□ -0.37
TMCO1-202ENST00000392129 HSPA9P38646 679 aaKnown RBP12.77□□□□□ -0.37
TMCO1-202ENST00000392129 GRIK1P39086 918 aa12.77□□□□□ -0.37
TMCO1-202ENST00000392129 PBX3P40426 434 aa12.77□□□□□ -0.37
TMCO1-202ENST00000392129 OTUD4Q01804 1114 aaKnown RBP12.77□□□□□ -0.37
TMCO1-202ENST00000392129 ELAVL2Q12926 359 aaKnown RBP12.77□□□□□ -0.37
TMCO1-202ENST00000392129 TFDP2Q14188 446 aa12.77□□□□□ -0.37
TMCO1-202ENST00000392129 TRIP13Q15645 432 aaPredicted RBP12.77□□□□□ -0.37
TMCO1-202ENST00000392129 DPYSL2Q16555 572 aa12.77□□□□□ -0.37
TMCO1-202ENST00000392129 CTXN3Q4LDR2 81 aa12.77□□□□□ -0.37
TMCO1-202ENST00000392129 ZNF365Q70YC5 407 aa12.77□□□□□ -0.37
TMCO1-202ENST00000392129 GSTA5Q7RTV2 222 aa12.77□□□□□ -0.37
TMCO1-202ENST00000392129 FAM131BQ86XD5 332 aa12.77□□□□□ -0.37
TMCO1-202ENST00000392129 CCDC89Q8N998 374 aa12.77□□□□□ -0.37
TMCO1-202ENST00000392129 ART4Q93070 314 aa12.77□□□□□ -0.37
TMCO1-202ENST00000392129 FUBP3Q96I24 572 aaKnown RBP eCLIP12.77□□□□□ -0.376e-6■□□□□ 9.8
TMCO1-202ENST00000392129 FMO2Q99518 471 aa12.77□□□□□ -0.37
TMCO1-202ENST00000392129 AP4E1Q9UPM8 1137 aa12.77□□□□□ -0.37
TMCO1-202ENST00000392129 OR6C75A6NL08 312 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 ZNF487B1APH4 448 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 TNFRSF10BO14763 440 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 DGKIO75912 1065 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 ITGAVP06756 1048 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 NCAM1P13591 858 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 KLRC2P26717 231 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 RDXP35241 583 aaKnown RBP12.76□□□□□ -0.37
TMCO1-202ENST00000392129 DEUP1Q05D60 604 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 GPS2Q13227 327 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 ANKRD20A8PQ5CZ79 823 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 ZNF280DQ6N043 979 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 TMEM173Q86WV6 379 aaPredicted RBP12.76□□□□□ -0.37
TMCO1-202ENST00000392129 PSTKQ8IV42 348 aaKnown RBP12.76□□□□□ -0.37
TMCO1-202ENST00000392129 ALLCQ8N6M5 410 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 CCDC185Q8N715 623 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 SCAMP5Q8TAC9 235 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 LRRC45Q96CN5 670 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 FAF2Q96CS3 445 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 B3GALT6Q96L58 329 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 ZNF670Q9BS34 389 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 MAGEB5Q9BZ81 275 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 FAM129AQ9BZQ8 928 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 DHX35Q9H5Z1 703 aaKnown RBP12.76□□□□□ -0.37
TMCO1-202ENST00000392129 MTMR10Q9NXD2 777 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 ABI2Q9NYB9 513 aaPredicted RBP12.76□□□□□ -0.37
TMCO1-202ENST00000392129 RRN3Q9NYV6 651 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 WHRNQ9P202 907 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 FZD10Q9ULW2 581 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 ABHD14A-ACY1A0A1B0GW23 586 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 TRIM43BA6NCK2 446 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 TIMP1P01033 207 aa12.76□□□□□ -0.37
TMCO1-202ENST00000392129 KRT14P02533 472 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms