RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 FAM209BQ5JX69 171 aa6.92□□□□□ -1.3
SNORA40.4-201ENST00000390971 FAXCQ5TGI0 409 aa6.92□□□□□ -1.3
SNORA40.4-201ENST00000390971 KRT73Q86Y46 540 aa6.92□□□□□ -1.3
SNORA40.4-201ENST00000390971 ABHD5Q8WTS1 349 aa6.92□□□□□ -1.3
SNORA40.4-201ENST00000390971 SNX27Q96L92 541 aa6.92□□□□□ -1.3
SNORA40.4-201ENST00000390971 MMS19Q96T76 1030 aa6.92□□□□□ -1.3
SNORA40.4-201ENST00000390971 A0A087WZ62 844 aa6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 TCRBV5S1A1TA0A578 114 aa6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 GCATO75600 419 aa6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 FGF18O76093 207 aa6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 LATS1O95835 1130 aa6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 TMEM225BP0DP42 221 aa6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 TNFSF4P23510 183 aa6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 TM4SF4P48230 202 aa6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 FAM187BQ17R55 369 aa6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 LONRF1Q17RB8 773 aa6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 IL31Q6EBC2 164 aa6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 HIBCHQ6NVY1 386 aaPredicted RBP6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 CRTC1Q6UUV9 634 aa6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 TXLNBQ8N3L3 684 aa6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 RITA1Q96K30 269 aa6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 CCDC138Q96M89 665 aa6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 AS3MTQ9HBK9 375 aa6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 GJB4Q9NTQ9 266 aa6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 GAR1Q9NY12 217 aaKnown RBP6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 PHTF1Q9UMS5 762 aa6.91□□□□□ -1.3
SNORA40.4-201ENST00000390971 CGB1A6NKQ9 187 aa6.9□□□□□ -1.3
SNORA40.4-201ENST00000390971 RASA4BC9J798 803 aa6.9□□□□□ -1.3
SNORA40.4-201ENST00000390971 RASA4O43374 803 aa6.9□□□□□ -1.3
SNORA40.4-201ENST00000390971 CELA2AP08217 269 aa6.9□□□□□ -1.3
SNORA40.4-201ENST00000390971 ADRA1DP25100 572 aa6.9□□□□□ -1.3
SNORA40.4-201ENST00000390971 MCM5P33992 734 aa6.9□□□□□ -1.3
SNORA40.4-201ENST00000390971 MRNIPQ6NTE8 343 aa6.9□□□□□ -1.3
SNORA40.4-201ENST00000390971 C12orf76Q8N812 135 aaPredicted RBP6.9□□□□□ -1.3
SNORA40.4-201ENST00000390971 PNPLA1Q8N8W4 532 aa6.9□□□□□ -1.3
SNORA40.4-201ENST00000390971 SUN3Q8TAQ9 357 aa6.9□□□□□ -1.3
SNORA40.4-201ENST00000390971 DDB2Q92466 427 aa6.9□□□□□ -1.3
SNORA40.4-201ENST00000390971 RIPOR3Q96MK2 946 aa6.9□□□□□ -1.3
SNORA40.4-201ENST00000390971 MYD88Q99836 296 aa6.9□□□□□ -1.3
SNORA40.4-201ENST00000390971 ASIC5Q9NY37 505 aa6.9□□□□□ -1.3
SNORA40.4-201ENST00000390971 MAN2B2Q9Y2E5 1009 aa6.9□□□□□ -1.3
SNORA40.4-201ENST00000390971 USP1O94782 785 aa6.89□□□□□ -1.31
SNORA40.4-201ENST00000390971 TUBB4AP04350 444 aa6.89□□□□□ -1.31
SNORA40.4-201ENST00000390971 CYP2D6P10635 497 aa6.89□□□□□ -1.31
SNORA40.4-201ENST00000390971 APEHP13798 732 aaKnown RBP6.89□□□□□ -1.31
SNORA40.4-201ENST00000390971 CFHR3Q02985 330 aa6.89□□□□□ -1.31
SNORA40.4-201ENST00000390971 GPS1Q13098 491 aa6.89□□□□□ -1.31
SNORA40.4-201ENST00000390971 SRSF7Q16629 238 aaKnown RBP eCLIP6.89□□□□□ -1.31
SNORA40.4-201ENST00000390971 IZUMO3Q5VZ72 239 aa6.89□□□□□ -1.31
SNORA40.4-201ENST00000390971 KIAA0408Q6ZU52 694 aa6.89□□□□□ -1.31
SNORA40.4-201ENST00000390971 OR2C3Q8N628 320 aa6.89□□□□□ -1.31
SNORA40.4-201ENST00000390971 LINC01465Q8N7H1 131 aa6.89□□□□□ -1.31
SNORA40.4-201ENST00000390971 PARD3BQ8TEW8 1205 aa6.89□□□□□ -1.31
SNORA40.4-201ENST00000390971 TNIP3Q96KP6 325 aa6.89□□□□□ -1.31
SNORA40.4-201ENST00000390971 CEP83Q9Y592 693 aa6.89□□□□□ -1.31
SNORA40.4-201ENST00000390971 PPP6CO00743 305 aa6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 ADAMTS3O15072 1205 aa6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 NCK2O43639 380 aa6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 WDR47O94967 919 aa6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 HARSP12081 509 aaKnown RBP6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 SLC5A2P31639 672 aa6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 HTR7P34969 479 aa6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 ABCG1P45844 678 aa6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 NEK3P51956 506 aa6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 DGKQP52824 942 aa6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 DEUP1Q05D60 604 aa6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 FHL3Q13643 280 aa6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 ACOX1Q15067 660 aa6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 TMEM65Q6PI78 240 aa6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 CCDC28AQ8IWP9 274 aa6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 FAM71DQ8N9W8 422 aa6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 C8orf58Q8NAV2 365 aa6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 HS6ST2Q96MM7 605 aa6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 ASAP1Q9ULH1 1129 aa6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 ZMYND8Q9ULU4 1186 aaPredicted RBP6.88□□□□□ -1.31
SNORA40.4-201ENST00000390971 TMEM232C9JQI7 657 aa6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 H3BNC9 293 aa6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 CYP2A6P11509 494 aaPredicted RBP6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 CDK4P11802 303 aa6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 YY1P25490 414 aa6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 GABRB3P28472 473 aa6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 TXNL4AP83876 142 aaKnown RBP6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 MTAPQ13126 283 aa6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 PMS2P11Q13670 270 aa6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 ABLIM2Q6H8Q1 611 aa6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 VSTM1Q6UX27 236 aa6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 ZNF66Q6ZN08 573 aa6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 MAFAQ8NHW3 353 aaPredicted RBP6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 ZNF566Q969W8 418 aa6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 EDC3Q96F86 508 aaKnown RBP6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 C5orf34Q96MH7 638 aa6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 GDF15Q99988 308 aa6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 CINPQ9BW66 212 aaPredicted RBP6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 PCDHAC1Q9H158 963 aa6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 USP29Q9HBJ7 922 aa6.87□□□□□ -1.31
SNORA40.4-201ENST00000390971 FNDC1Q4ZHG4 1894 aaPredicted RBP6.86□□□□□ -1.31
SNORA40.4-201ENST00000390971 HNRNPDLO14979 420 aaKnown RBP6.86□□□□□ -1.31
SNORA40.4-201ENST00000390971 PLIN1O60240 522 aa6.86□□□□□ -1.31
SNORA40.4-201ENST00000390971 NDST3O95803 873 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms