RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 TACR3P29371 465 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 SDHAP31040 664 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 HOXA13P31271 388 aaPredicted RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 WNT5AP41221 380 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 NPTX2P47972 431 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 KCNJ6P48051 423 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF165P49910 485 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 PEX5P50542 639 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 ALDH5A1P51649 535 aaPredicted RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 CLCN3P51790 818 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 HNRNPMP52272 730 aaKnown RBP eCLIP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 PDE1AP54750 535 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC12A2P55011 1212 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 LINC01547P58512 204 aaPredicted RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 LILRA4P59901 499 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 YPEL5P62699 121 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 ABATP80404 500 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC7A5Q01650 507 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC6A3Q01959 620 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 CYP4F3Q08477 520 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 SLFN5Q08AF3 891 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF844Q08AG5 666 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 GRSF1Q12849 480 aaKnown RBP eCLIP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 COX10Q12887 443 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 MTA1Q13330 715 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF211Q13398 564 aaPredicted RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 OLIG2Q13516 323 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 PWP1Q13610 501 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 DYRK1AQ13627 763 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 BOP1Q14137 746 aaKnown RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 GPR18Q14330 331 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 NEDD9Q14511 834 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 C16orf72Q14CZ0 275 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 LARS2Q15031 903 aaKnown RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 DLGAP5Q15398 846 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 SEC23AQ15436 765 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 SEC23BQ15437 767 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 GPR19Q15760 415 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 C15orf32Q32M92 178 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 GNPTABQ3T906 1256 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 GLIPR1L2Q4G1C9 344 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 TAF1BQ53T94 588 aaPredicted RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 PITRM1Q5JRX3 1037 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 MFSD14BQ5SR56 506 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 TTC39AQ5SRH9 613 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 PRAMEF14Q5SWL7 426 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 CC2D1BQ5T0F9 858 aaKnown RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 TMEM63BQ5T3F8 832 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 GJC2Q5T442 439 aaPredicted RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 DCAF12L1Q5VU92 463 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC35E4Q6ICL7 350 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 HIBCHQ6NVY1 386 aaPredicted RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 ARMCX5Q6P1M9 558 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 CC2D1AQ6P1N0 951 aaPredicted RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 FBXO38Q6PIJ6 1188 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 PAQR6Q6TCH4 344 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 IGFL1Q6UW32 110 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 PARM1Q6UWI2 310 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 LCTLQ6UWM7 567 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 IGFL2Q6UWQ7 119 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 VSTM1Q6UX27 236 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 VITQ6UXI7 678 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 UNQ6126/PRO20091Q6UXV3 157 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 RSPO2Q6UXX9 243 aaPredicted RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 BAIAP2L2Q6UXY1 529 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 CEACAM20Q6UY09 585 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 TFAP2EQ6VUC0 442 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 GK5Q6ZS86 529 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 FAM196AQ6ZSG2 479 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 Q6ZTK2 550 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 ESPNLQ6ZVH7 1005 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 NEK10Q6ZWH5 1172 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 FAM57BQ71RH2 274 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 TUBA1AQ71U36 451 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 NOTCH2NLQ7Z3S9 236 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 ARHGAP22Q7Z5H3 698 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 CALHM3Q86XJ0 350 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 PTRH1Q86Y79 214 aaKnown RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 TRIM59Q8IWR1 403 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 DHX37Q8IY37 1157 aaKnown RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 C16orf71Q8IYS4 520 aaPredicted RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 PRR22Q8IZ63 422 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 Q8N377 158 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 LRRC71Q8N4P6 559 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 CCDC82Q8N4S0 544 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 PAQR4Q8N4S7 273 aaPredicted RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 POM121L12Q8N7R1 296 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 RNF152Q8N8N0 203 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF441Q8N8Z8 693 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 Q8N9L7 120 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 Q8NA96 180 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 GOLM1Q8NBJ4 401 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 LSM14AQ8ND56 463 aaKnown RBP-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF540Q8NDQ6 660 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 BVESQ8NE79 360 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 ABHD11Q8NFV4 315 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 DMBX1Q8NFW5 382 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 OR10V1Q8NGI7 309 aa-0.23□□□□□ -2.45
TRAJ28-201ENST00000390509 OR14A16Q8NHC5 309 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms