RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 S100BP04271 92 aaPredicted RBP14.74□□□□□ -0.05
RTF1-201ENST00000389629 MSX2P35548 267 aaPredicted RBP14.74□□□□□ -0.05
RTF1-201ENST00000389629 ADRM1Q16186 407 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 ZBTB41Q5SVQ8 909 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 ZBTB49Q6ZSB9 765 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 SLC51AQ86UW1 340 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 LZICQ8WZA0 190 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 MAML3Q96JK9 1138 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 PHACTR1Q9C0D0 580 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 KLHL25Q9H0H3 589 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 ZNF70Q9UC06 446 aaPredicted RBP14.74□□□□□ -0.05
RTF1-201ENST00000389629 SUN2Q9UH99 717 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 FGFR3P22607 806 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 GLRBP48167 497 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 MAP4K3Q8IVH8 894 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 DDIASQ8IXT1 998 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 FLAD1Q8NFF5 587 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 ZNF669Q96BR6 464 aaPredicted RBP14.73□□□□□ -0.05
RTF1-201ENST00000389629 VCPIP1Q96JH7 1222 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 ZBTB45Q96K62 511 aaPredicted RBP14.73□□□□□ -0.05
RTF1-201ENST00000389629 EFCAB1Q9HAE3 211 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 ZNF277Q9NRM2 450 aaPredicted RBP14.73□□□□□ -0.05
RTF1-201ENST00000389629 ATP11BQ9Y2G3 1177 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 WDR46O15213 610 aaKnown RBP14.73□□□□□ -0.05
RTF1-201ENST00000389629 ESRRBO95718 433 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 ADORA2BP29275 332 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 STAT5BP51692 787 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 GTF2BQ00403 316 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 CNPY1Q3B7I2 92 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 SIX6OS1Q8N1H7 587 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 SH3BP5O60239 455 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 TRPC1P48995 793 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 EIF2B2P49770 351 aaKnown RBP14.73□□□□□ -0.05
RTF1-201ENST00000389629 EFNA5P52803 228 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 MAPRE2Q15555 327 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 KYQ8NBH2 561 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 TAS2R1Q9NYW7 299 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 UMODL1Q5DID0 1318 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 CAPN8A6NHC0 703 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 SAC3D1A6NKF1 404 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 ATP6V1G1O75348 118 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 CHRNB2P17787 502 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 CHRNA5P30532 468 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 HOXD13P35453 343 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 PTK2BQ14289 1009 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 INPP5AQ14642 412 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 SLC15A2Q16348 729 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 USP18Q9UMW8 372 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 BCL9LQ86UU0 1499 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 MYH15Q9Y2K3 1946 aa14.73□□□□□ -0.05
RTF1-201ENST00000389629 LCP1P13796 627 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 SPRP35270 261 aaPredicted RBP14.72□□□□□ -0.05
RTF1-201ENST00000389629 RAP1GAPP47736 663 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 CIAPIN1Q6FI81 312 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 TMCO5AQ8N6Q1 288 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 FAM151AQ8WW52 585 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 NCLNQ969V3 563 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 DGCR14Q96DF8 476 aaKnown RBP14.72□□□□□ -0.05
RTF1-201ENST00000389629 CGRRF1Q99675 332 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 C1orf232A0A0U1RR37 186 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 MRPS15P82914 257 aaKnown RBP14.72□□□□□ -0.05
RTF1-201ENST00000389629 SNX32Q86XE0 403 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 RMND5BQ96G75 393 aaPredicted RBP14.72□□□□□ -0.05
RTF1-201ENST00000389629 RPS6KL1Q9Y6S9 549 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 ALOX15BO15296 676 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 CPA3P15088 417 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 CDK7P50613 346 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 NUP107P57740 925 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 DAB2P98082 770 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 RWDD4Q6NW29 188 aaKnown RBP14.72□□□□□ -0.05
RTF1-201ENST00000389629 SATL1Q86VE3 508 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 CLEC4FQ8N1N0 589 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 LRRC71Q8N4P6 559 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 AP4S1Q9Y587 144 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 C15orf38-AP3S2A0A0A6YYH1 394 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 ANGPT2O15123 496 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 MT-CO1P00395 513 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 OCM2P0CE71 109 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 OCMP0CE72 109 aaPredicted RBP14.72□□□□□ -0.05
RTF1-201ENST00000389629 RPL22P35268 128 aaKnown RBP14.72□□□□□ -0.05
RTF1-201ENST00000389629 NME3Q13232 169 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 CYP2R1Q6VVX0 501 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 ARPINQ7Z6K5 226 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 C12orf50Q8NA57 414 aaPredicted RBP14.72□□□□□ -0.05
RTF1-201ENST00000389629 SYTL5Q8TDW5 730 aaPredicted RBP14.72□□□□□ -0.05
RTF1-201ENST00000389629 NAT14Q8WUY8 206 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 CASP10Q92851 521 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 FRMD8P1Q9BZ68 369 aaPredicted RBP14.72□□□□□ -0.05
RTF1-201ENST00000389629 FAM49BQ9NUQ9 324 aa14.72□□□□□ -0.05
RTF1-201ENST00000389629 ASMTLO95671 621 aa14.71□□□□□ -0.05
RTF1-201ENST00000389629 STKLD1Q8NE28 680 aa14.71□□□□□ -0.05
RTF1-201ENST00000389629 TUBGCP5Q96RT8 1024 aa14.71□□□□□ -0.05
RTF1-201ENST00000389629 ACAD9Q9H845 621 aa14.71□□□□□ -0.05
RTF1-201ENST00000389629 TCF7L2Q9NQB0 619 aa14.71□□□□□ -0.05
RTF1-201ENST00000389629 MAN1C1Q9NR34 630 aa14.71□□□□□ -0.05
RTF1-201ENST00000389629 RRN3Q9NYV6 651 aa14.71□□□□□ -0.05
RTF1-201ENST00000389629 LGALS13Q9UHV8 139 aa14.71□□□□□ -0.05
RTF1-201ENST00000389629 CSPG5O95196 566 aa14.71□□□□□ -0.05
RTF1-201ENST00000389629 UQCRBP14927 111 aa14.71□□□□□ -0.05
RTF1-201ENST00000389629 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms