RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 TRIM72Q6ZMU5 477 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 IRF2BP2Q7Z5L9 587 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 SCN4BQ8IWT1 228 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 ARHGEF26Q96DR7 871 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 TMEM120AQ9BXJ8 343 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 SEPT10Q9P0V9 454 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 PSMC3IPQ9P2W1 217 aaPredicted RBP19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 RASA2Q15283 850 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 DUSP28Q4G0W2 176 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 TDRD10Q5VZ19 366 aaKnown RBP19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 ACOT1Q86TX2 421 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 COL24A1Q17RW2 1714 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 ARAP2Q8WZ64 1704 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 A6NHS1 94 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 GJB6O95452 261 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 ELNP15502 786 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 TUBP50607 506 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 DCTN2Q13561 401 aaKnown RBP19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 C16orf72Q14CZ0 275 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 RARS2Q5T160 578 aaKnown RBP19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 NUDCD3Q8IVD9 361 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 CFAP36Q96G28 342 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 DNAJC1Q96KC8 554 aaKnown RBP19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 CDT1Q9H211 546 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 PARVAQ9NVD7 372 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 ARHGAP28Q9P2N2 729 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 LRRC42Q9Y546 428 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 CDC42EP1Q00587 391 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 C4orf50Q6ZRC1 276 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 CCT7Q99832 543 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 PHACTR1Q9C0D0 580 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 XPNPEP3Q9NQH7 507 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 COL2A1P02458 1487 aaPredicted RBP19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 ZBTB48P10074 688 aaPredicted RBP19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 SMPD1P17405 629 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 MARSP56192 900 aaKnown RBP19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 SMTNL2Q2TAL5 461 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 TMEM259Q4ZIN3 620 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 ACAD10Q6JQN1 1059 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 WDR49Q8IV35 697 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 NT5C1AQ9BXI3 368 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 MRPL1Q9BYD6 325 aaKnown RBP19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 GRIP2Q9C0E4 1043 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 STARD13Q9Y3M8 1113 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 DTNAQ9Y4J8 743 aa19.55■□□□□ 0.72
PPFIA1-202ENST00000389547 PYGMP11217 842 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 PKN2Q16513 984 aaKnown RBP19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 JADE1Q6IE81 842 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 LRRC8BQ6P9F7 803 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 RFWD3Q6PCD5 774 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 PPM1NQ8N819 430 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 NR1H4Q96RI1 486 aaPredicted RBP19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 ACO2Q99798 780 aaKnown RBP19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 NINJ2Q9NZG7 142 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 LMCD1Q9NZU5 365 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 HEY1Q9Y5J3 304 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 MYH4Q9Y623 1939 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 MCF2LO15068 1137 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 TAC1P20366 129 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 ARL4CP56559 192 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 PYDC1Q8WXC3 89 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 ZNF333Q96JL9 665 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 HAUS8Q9BT25 410 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 A0A0A6YYK5 440 aaPredicted RBP19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 YY1P25490 414 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 AP1B1Q10567 949 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 CBX3Q13185 183 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 PRELID2Q8N945 189 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 EPS8L1Q8TE68 723 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 ZNF606Q8WXB4 792 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 FAM111AQ96PZ2 611 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 ETNK2Q9NVF9 386 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 UVRAGQ9P2Y5 699 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 GTF3C4Q9UKN8 822 aa19.54■□□□□ 0.72
PPFIA1-202ENST00000389547 FCHO1O14526 889 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 USP1O94782 785 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 ATN1P54259 1190 aaPredicted RBP19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 KIAA1841Q6NSI8 718 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 HASPINQ8TF76 798 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 ZNF75CPQ92670 426 aaPredicted RBP19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 STRIP2Q9ULQ0 834 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 KDM1AO60341 852 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 NFICP08651 508 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 SMIM10L2AP0DMW4 78 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 SMIM10L2BP0DMW5 78 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 MLH1P40692 756 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 MARCKSL1P49006 195 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 RTP1P59025 263 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 ACAP1Q15027 740 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 GSTA3Q16772 222 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 SLC5A9Q2M3M2 681 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 SLC45A4Q5BKX6 768 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 FAM117BQ6P1L5 589 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 RHOT1Q8IXI2 618 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 CCNYQ8ND76 341 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 INHBEP58166 350 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 TRMT5Q32P41 509 aaKnown RBP19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 SYCP2LQ5T4T6 812 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 RNF180Q86T96 592 aa19.53■□□□□ 0.72
PPFIA1-202ENST00000389547 APPL2Q8NEU8 664 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms