RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 CHD9Q3L8U1 2897 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 NBNO60934 754 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 KRT7P08729 469 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 NCAM1P13591 858 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 NR1D1P20393 614 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 CTCFP49711 727 aaPredicted RBP10.59□□□□□ -0.71
LTN1-203ENST00000389195 RNASELQ05823 741 aaKnown RBP10.59□□□□□ -0.71
LTN1-203ENST00000389195 ANKRD20A8PQ5CZ79 823 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 OTUD1Q5VV17 481 aaPredicted RBP10.59□□□□□ -0.71
LTN1-203ENST00000389195 RHBDF2Q6PJF5 856 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 TRAF7Q6Q0C0 670 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 LRRC31Q6UY01 552 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 UNC93AQ86WB7 457 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 ECHDC2Q86YB7 292 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 ZBED8Q8IZ13 594 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 PCSK9Q8NBP7 692 aaKnown RBP10.59□□□□□ -0.71
LTN1-203ENST00000389195 ZNF784Q8NCA9 323 aaPredicted RBP10.59□□□□□ -0.71
LTN1-203ENST00000389195 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.59□□□□□ -0.71
LTN1-203ENST00000389195 RSAD2Q8WXG1 361 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 MYLPFQ96A32 169 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 PCDH18Q9HCL0 1135 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 HMX1Q9NP08 348 aaPredicted RBP10.59□□□□□ -0.71
LTN1-203ENST00000389195 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.59□□□□□ -0.71
LTN1-203ENST00000389195 CWC15Q9P013 229 aaKnown RBP10.59□□□□□ -0.71
LTN1-203ENST00000389195 WDR35Q9P2L0 1181 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 MTRF1LQ9UGC7 380 aaKnown RBP10.59□□□□□ -0.71
LTN1-203ENST00000389195 GABRDO14764 452 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 KCNN4O15554 427 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 LRPAP1P30533 357 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 SSTR1P30872 391 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 GRIA1P42261 906 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 TAP1Q03518 808 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 IGDCC3Q8IVU1 814 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 SIX6OS1Q8N1H7 587 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 CCDC89Q8N998 374 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 SLC35B2Q8TB61 432 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 P3H4Q92791 437 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 TNIP3Q96KP6 325 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 KCTD15Q96SI1 283 aaPredicted RBP10.58□□□□□ -0.72
LTN1-203ENST00000389195 MTMR10Q9NXD2 777 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 PDCD11Q14690 1871 aaKnown RBP10.58□□□□□ -0.72
LTN1-203ENST00000389195 VCANP13611 3396 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 GOLGA6L10A6NI86 522 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 POC1B-GALNT4F8VUJ3 575 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 CAPN9O14815 690 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 MSI1O43347 362 aaKnown RBP10.58□□□□□ -0.72
LTN1-203ENST00000389195 XPOTO43592 962 aaKnown RBP10.58□□□□□ -0.72
LTN1-203ENST00000389195 KPNA6O60684 536 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 TMEM63AO94886 807 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 CETN2P41208 172 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 IRAK1P51617 712 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 APLP1P51693 650 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 DDR2Q16832 855 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 ARHGAP17Q68EM7 881 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 FAM35AQ86V20 835 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 SCN4BQ8IWT1 228 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 FNIP1Q8TF40 1166 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 RNF157Q96PX1 679 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 SELENOSQ9BQE4 189 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 CAPS2Q9BXY5 557 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 KIF9Q9HAQ2 790 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 ABI2Q9NYB9 513 aaPredicted RBP10.58□□□□□ -0.72
LTN1-203ENST00000389195 NINJ2Q9NZG7 142 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 KIAA1257Q9ULG3 409 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 AP4E1Q9UPM8 1137 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 SLC27A5Q9Y2P5 690 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 CEP290O15078 2479 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 CASP8AP2Q9UKL3 1982 aa10.58□□□□□ -0.72
LTN1-203ENST00000389195 PRRC2BQ5JSZ5 2229 aaKnown RBP10.57□□□□□ -0.72
LTN1-203ENST00000389195 FAM200BP0CF97 657 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 L1CAMP32004 1257 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 PNPLA4P41247 253 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 IFNAR2P48551 515 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 DRG2P55039 364 aaKnown RBP10.57□□□□□ -0.72
LTN1-203ENST00000389195 HNRNPH2P55795 449 aaKnown RBP10.57□□□□□ -0.72
LTN1-203ENST00000389195 YWHAZP63104 245 aaKnown RBP10.57□□□□□ -0.72
LTN1-203ENST00000389195 DSC3Q14574 896 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 LRRC38Q5VT99 294 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 RUBCNQ92622 972 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 EXOC4Q96A65 974 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 HNRNPABQ99729 332 aaKnown RBP10.57□□□□□ -0.72
LTN1-203ENST00000389195 WDR83Q9BRX9 315 aaKnown RBP10.57□□□□□ -0.72
LTN1-203ENST00000389195 C12orf65Q9H3J6 166 aaKnown RBP10.57□□□□□ -0.72
LTN1-203ENST00000389195 DDX56Q9NY93 547 aaKnown RBP10.57□□□□□ -0.72
LTN1-203ENST00000389195 SEPT10Q9P0V9 454 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 SFMBT1Q9UHJ3 866 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 GOLGA8KD6RF30 607 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 ITIH2P19823 946 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 WARSP23381 471 aaKnown RBP10.57□□□□□ -0.72
LTN1-203ENST00000389195 CRADDP78560 199 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 MRPS5P82675 430 aaKnown RBP10.57□□□□□ -0.72
LTN1-203ENST00000389195 PDIA2Q13087 525 aaKnown RBP10.57□□□□□ -0.72
LTN1-203ENST00000389195 PPP2R5EQ16537 467 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 ERMARDQ5T6L9 678 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 MICALCLQ6ZW33 695 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 BBS12Q6ZW61 710 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 POLNQ7Z5Q5 900 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 TOP6BLQ8N6T0 577 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 ATAD1Q8NBU5 361 aa10.57□□□□□ -0.72
LTN1-203ENST00000389195 CPT1BQ92523 772 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms