RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 ABHD8Q96I13 439 aa-0.18□□□□□ -2.44
RNU6-540P-201ENST00000384622 SHDQ96IW2 340 aa-0.18□□□□□ -2.44
RNU6-540P-201ENST00000384622 FEM1CQ96JP0 617 aa-0.18□□□□□ -2.44
RNU6-540P-201ENST00000384622 IMPG2Q9BZV3 1241 aa-0.18□□□□□ -2.44
RNU6-540P-201ENST00000384622 ISCUQ9H1K1 167 aa-0.18□□□□□ -2.44
RNU6-540P-201ENST00000384622 DIAPH3Q9NSV4 1193 aa-0.18□□□□□ -2.44
RNU6-540P-201ENST00000384622 SIRT3Q9NTG7 399 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-540P-201ENST00000384622 OCIAD1Q9NX40 245 aa-0.18□□□□□ -2.44
RNU6-540P-201ENST00000384622 ACTL7AQ9Y615 435 aa-0.18□□□□□ -2.44
RNU6-540P-201ENST00000384622 RYR3Q15413 4870 aa-0.18□□□□□ -2.44
RNU6-540P-201ENST00000384622 A1L4Q6 167 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 TULP2O00295 520 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 CLGNO14967 610 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 SPRY3O43610 288 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 AKR1B10O60218 316 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 SLC43A1O75387 559 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 ATP1A1P05023 1023 aaKnown RBP-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 CYP1A2P05177 515 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 CHRNB1P11230 501 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 ITGALP20701 1170 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 SOX9P48436 509 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 COPB1P53618 953 aaKnown RBP-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 LINC01547P58512 204 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 CREMQ03060 361 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 SREBF2Q12772 1141 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 ARHGAP44Q17R89 818 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 ZNF876PQ49A33 203 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 VSTM1Q6UX27 236 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 Q6ZVL8 140 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 FJX1Q86VR8 437 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 LRP11Q86VZ4 500 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 PQLC1Q8N2U9 271 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 FAM109AQ8N4B1 249 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 CCDC82Q8N4S0 544 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 FAM169BQ8N8A8 192 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 KIAA1958Q8N8K9 716 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 BCAS4Q8TDM0 211 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 ZNF653Q96CK0 615 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 ADGRG7Q96K78 797 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 KLHL32Q96NJ5 620 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 SMOC2Q9H3U7 446 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 EVA1AQ9H8M9 152 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 GLOD4Q9HC38 313 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 PAPOLBQ9NRJ5 636 aaKnown RBP-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 TMEM140Q9NV12 185 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 AJAP1Q9UKB5 411 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 MAN1B1Q9UKM7 699 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 RALYQ9UKM9 306 aaKnown RBP-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 RUVBL1Q9Y265 456 aaKnown RBP-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 SIRT4Q9Y6E7 314 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 STAB2Q8WWQ8 2551 aa-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 EP300Q09472 2414 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-540P-201ENST00000384622 H7C1D1 291 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 ARHGEF9O43307 516 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 SOAT2O75908 522 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 EDN1P05305 212 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 ITGB8P26012 769 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 GUCY1A2P33402 732 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 PTGER3P43115 390 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 PRB3Q04118 309 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 ENPP2Q13822 863 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 SHHQ15465 462 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 SNAI3Q3KNW1 292 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 FNBP1LQ5T0N5 605 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 ARHGAP17Q68EM7 881 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 MRM1Q6IN84 353 aaKnown RBP-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 RETSATQ6NUM9 610 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 ESRP1Q6NXG1 681 aaKnown RBP-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 FBXO38Q6PIJ6 1188 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 C19orf48Q6RUI8 117 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 DCDC5Q6ZRR9 648 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 ANKRD44Q8N8A2 993 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 NTNG2Q96CW9 530 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 PAWRQ96IZ0 340 aaKnown RBP-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 RNPC3Q96LT9 517 aaKnown RBP-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 ZNF285Q96NJ3 590 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 OPRPNQ99935 248 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 DPCDQ9BVM2 203 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 IL25Q9H293 177 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 LDAHQ9H6V9 325 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 LANCL2Q9NS86 450 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 ZFP57Q9NU63 452 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 ZDHHC18Q9NUE0 388 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 GPR83Q9NYM4 423 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 MALT1Q9UDY8 824 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 PRSS50Q9UI38 385 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 AGO2Q9UKV8 859 aaKnown RBP-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 POMT2Q9UKY4 750 aa-0.2□□□□□ -2.44
RNU6-540P-201ENST00000384622 RNF213Q63HN8 5207 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 TRAV20A0A0B4J274 112 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 AP4M1O00189 453 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 POLRMTO00411 1230 aaKnown RBP-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 LATO43561 262 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 UGDHO60701 494 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 USP12O75317 370 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 FGAP02671 866 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 RARBP10826 455 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 TSHRP16473 764 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 SLC12A2P55011 1212 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms