RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 WARSP23381 471 aaKnown RBP8.09□□□□□ -1.11
CDKL5-202ENST00000379996 MAN1A1P33908 653 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 BMP8BP34820 402 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 KCNJ1P48048 391 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 RWDD2BP57060 319 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 OSTNP61366 133 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 NOMO3P69849 1222 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 TFAMQ00059 246 aaKnown RBP8.09□□□□□ -1.11
CDKL5-202ENST00000379996 DENND2CQ68D51 928 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 LLGL2Q6P1M3 1020 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 UNC93AQ86WB7 457 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 OTUD6BQ8N6M0 293 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 SCG3Q8WXD2 468 aaKnown RBP8.09□□□□□ -1.11
CDKL5-202ENST00000379996 ZNF653Q96CK0 615 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 FAM84AQ96KN4 292 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 GAD1Q99259 594 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 TET1Q8NFU7 2136 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 MEIS3P2A8K0S8 358 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 FGBP02675 491 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 MYBL1P10243 752 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 CREB1P16220 341 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 TYMPP19971 482 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 MYL6P60660 151 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 KRT17Q04695 432 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 CBLBQ13191 982 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 TRPC3Q13507 836 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 SKIDA1Q1XH10 827 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 ZNF699Q32M78 642 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 SEL1L2Q5TEA6 688 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 PHF13Q86YI8 300 aaPredicted RBP8.09□□□□□ -1.11
CDKL5-202ENST00000379996 KATNAL2Q8IYT4 538 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 LRRC34Q8IZ02 419 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 TMEM86AQ8N2M4 240 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 BADQ92934 168 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 HPDLQ96IR7 371 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 CABS1Q96KC9 395 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 SERPINB12Q96P63 405 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 TBC1D13Q9NVG8 400 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 DSEQ9UL01 958 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 NUB1Q9Y5A7 615 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 PCDHGB7Q9Y5F8 929 aa8.09□□□□□ -1.11
CDKL5-202ENST00000379996 GABRDO14764 452 aa8.09□□□□□ -1.12
CDKL5-202ENST00000379996 PSTPIP1O43586 416 aa8.09□□□□□ -1.12
CDKL5-202ENST00000379996 GJB6O95452 261 aa8.09□□□□□ -1.12
CDKL5-202ENST00000379996 POLR2BP30876 1174 aaKnown RBP8.09□□□□□ -1.12
CDKL5-202ENST00000379996 SLC1A1P43005 524 aa8.09□□□□□ -1.12
CDKL5-202ENST00000379996 TAF6P49848 677 aa8.09□□□□□ -1.12
CDKL5-202ENST00000379996 PDE6CP51160 858 aa8.09□□□□□ -1.12
CDKL5-202ENST00000379996 TAS2R40P59535 323 aa8.09□□□□□ -1.12
CDKL5-202ENST00000379996 HIBCHQ6NVY1 386 aaPredicted RBP8.09□□□□□ -1.12
CDKL5-202ENST00000379996 DRICH1Q6PGQ1 229 aaPredicted RBP8.09□□□□□ -1.12
CDKL5-202ENST00000379996 C7orf61Q8IZ16 206 aa8.09□□□□□ -1.12
CDKL5-202ENST00000379996 CYP4X1Q8N118 509 aa8.09□□□□□ -1.12
CDKL5-202ENST00000379996 CWH43Q9H720 699 aa8.09□□□□□ -1.12
CDKL5-202ENST00000379996 CENPFP49454 3210 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 BPTFQ12830 3046 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 PTPRDP23468 1912 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 C3orf70A6NLC5 250 aaPredicted RBP8.08□□□□□ -1.12
CDKL5-202ENST00000379996 CCT8L1PA6NM43 557 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 PROSCO94903 275 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 C1RP00736 705 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 LINC00271P0C7V0 271 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 ITIH2P19823 946 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 RRM1P23921 792 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 SCNN1GP51170 649 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 MGAT5Q09328 741 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 PPM1KQ8N3J5 372 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 CLP1Q92989 425 aaKnown RBP8.08□□□□□ -1.12
CDKL5-202ENST00000379996 LPPQ93052 612 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 C18orf25Q96B23 403 aaPredicted RBP8.08□□□□□ -1.12
CDKL5-202ENST00000379996 ZFP42Q96MM3 310 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 KIAA1257Q9ULG3 409 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 AGAP1Q9UPQ3 857 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 SCN1AP35498 2009 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 GBF1Q92538 1859 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 SNX3O60493 162 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 ECEL1O95672 775 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 TTC4O95801 387 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 BPIFB4P59827 614 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 LILRA4P59901 499 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 MAMLD1Q13495 774 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 ZNF667Q5HYK9 610 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 PPP1R2P3Q6NXS1 205 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 CYB5D1Q6P9G0 228 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDKL5-202ENST00000379996 ASRGL1Q7L266 308 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 CROCCP2Q86T23 111 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 MAML1Q92585 1016 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 SNF8Q96H20 258 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 SUSD3Q96L08 255 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 PRMT1Q99873 361 aaKnown RBP8.08□□□□□ -1.12
CDKL5-202ENST00000379996 PI4K2AQ9BTU6 479 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 MTIF3Q9H2K0 278 aaKnown RBP8.08□□□□□ -1.12
CDKL5-202ENST00000379996 PRDM5Q9NQX1 630 aaPredicted RBP8.08□□□□□ -1.12
CDKL5-202ENST00000379996 KLC4Q9NSK0 619 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 EVA1BQ9NVM1 165 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 NINJ2Q9NZG7 142 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 LRFN2Q9ULH4 789 aa8.08□□□□□ -1.12
CDKL5-202ENST00000379996 KPNA7A9QM74 516 aa8.07□□□□□ -1.12
CDKL5-202ENST00000379996 SYN3O14994 580 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms