RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 OVCA2Q8WZ82 227 aa18.84■□□□□ 0.61
PDLIM4-202ENST00000379018 JAKMIP2Q96AA8 810 aa18.84■□□□□ 0.61
PDLIM4-202ENST00000379018 BBS2Q9BXC9 721 aa18.84■□□□□ 0.61
PDLIM4-202ENST00000379018 AGPAT3Q9NRZ7 376 aa18.84■□□□□ 0.61
PDLIM4-202ENST00000379018 AP1G2O75843 785 aa18.83■□□□□ 0.6
PDLIM4-202ENST00000379018 BIRC3Q13489 604 aa18.83■□□□□ 0.6
PDLIM4-202ENST00000379018 PSMD6Q15008 389 aa18.83■□□□□ 0.6
PDLIM4-202ENST00000379018 TRIP6Q15654 476 aaKnown RBP18.83■□□□□ 0.6
PDLIM4-202ENST00000379018 ZNF423Q2M1K9 1284 aa18.83■□□□□ 0.6
PDLIM4-202ENST00000379018 SMARCD1Q96GM5 515 aa18.83■□□□□ 0.6
PDLIM4-202ENST00000379018 USP28Q96RU2 1077 aa18.83■□□□□ 0.6
PDLIM4-202ENST00000379018 TRIM9Q9C026 710 aa18.83■□□□□ 0.6
PDLIM4-202ENST00000379018 DMAP1Q9NPF5 467 aaPredicted RBP18.83■□□□□ 0.6
PDLIM4-202ENST00000379018 CACNA2D2Q9NY47 1150 aa18.83■□□□□ 0.6
PDLIM4-202ENST00000379018 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.82■□□□□ 0.6
PDLIM4-202ENST00000379018 TLR5O60602 858 aa18.82■□□□□ 0.6
PDLIM4-202ENST00000379018 ZNF217O75362 1048 aa18.82■□□□□ 0.6
PDLIM4-202ENST00000379018 TBX18O95935 607 aa18.82■□□□□ 0.6
PDLIM4-202ENST00000379018 CCDC130P13994 396 aa18.82■□□□□ 0.6
PDLIM4-202ENST00000379018 TYRP14679 529 aa18.82■□□□□ 0.6
PDLIM4-202ENST00000379018 CASP4P49662 377 aa18.82■□□□□ 0.6
PDLIM4-202ENST00000379018 PGFP49763 221 aa18.82■□□□□ 0.6
PDLIM4-202ENST00000379018 SCAPQ12770 1279 aa18.82■□□□□ 0.6
PDLIM4-202ENST00000379018 ZNF699Q32M78 642 aa18.82■□□□□ 0.6
PDLIM4-202ENST00000379018 ERICH6BQ5W0A0 696 aa18.82■□□□□ 0.6
PDLIM4-202ENST00000379018 TOGARAM2Q6ZUX3 1019 aa18.82■□□□□ 0.6
PDLIM4-202ENST00000379018 RAB44Q7Z6P3 723 aaPredicted RBP18.82■□□□□ 0.6
PDLIM4-202ENST00000379018 KCNV2Q8TDN2 545 aa18.82■□□□□ 0.6
PDLIM4-202ENST00000379018 ZNF516Q92618 1163 aa18.82■□□□□ 0.6
PDLIM4-202ENST00000379018 SYAP1Q96A49 352 aaPredicted RBP18.82■□□□□ 0.6
PDLIM4-202ENST00000379018 XPO6Q96QU8 1125 aaKnown RBP18.82■□□□□ 0.6
PDLIM4-202ENST00000379018 UPF2Q9HAU5 1272 aaKnown RBP18.82■□□□□ 0.6
PDLIM4-202ENST00000379018 ADAMTS20P59510 1910 aa18.81■□□□□ 0.6
PDLIM4-202ENST00000379018 MEI4A8MW99 385 aa18.81■□□□□ 0.6
PDLIM4-202ENST00000379018 PRRT4C9JH25 899 aa18.81■□□□□ 0.6
PDLIM4-202ENST00000379018 EIF3DO15371 548 aaKnown RBP eCLIP18.81■□□□□ 0.6
PDLIM4-202ENST00000379018 TGFB1I1O43294 461 aa18.81■□□□□ 0.6
PDLIM4-202ENST00000379018 FTH1P19P0C7X4 201 aa18.81■□□□□ 0.6
PDLIM4-202ENST00000379018 FAM26FQ5R3K3 315 aa18.81■□□□□ 0.6
PDLIM4-202ENST00000379018 ACOT1Q86TX2 421 aa18.81■□□□□ 0.6
PDLIM4-202ENST00000379018 PROSER1Q86XN7 944 aa18.81■□□□□ 0.6
PDLIM4-202ENST00000379018 NAXDQ8IW45 347 aa18.81■□□□□ 0.6
PDLIM4-202ENST00000379018 XXYLT1Q8NBI6 393 aa18.81■□□□□ 0.6
PDLIM4-202ENST00000379018 DHX58Q96C10 678 aa18.81■□□□□ 0.6
PDLIM4-202ENST00000379018 MIR1-1HGQ9H1L0 117 aa18.81■□□□□ 0.6
PDLIM4-202ENST00000379018 TNMDQ9H2S6 317 aa18.81■□□□□ 0.6
PDLIM4-202ENST00000379018 DNAAF2Q9NVR5 837 aaKnown RBP18.81■□□□□ 0.6
PDLIM4-202ENST00000379018 PLK2Q9NYY3 685 aa18.81■□□□□ 0.6
PDLIM4-202ENST00000379018 ANKRD11Q6UB99 2663 aaPredicted RBP18.81■□□□□ 0.6
PDLIM4-202ENST00000379018 A0A1W2PQD8 194 aa18.8■□□□□ 0.6
PDLIM4-202ENST00000379018 WASH3PC4AMC7 463 aa18.8■□□□□ 0.6
PDLIM4-202ENST00000379018 MDM4O15151 490 aa18.8■□□□□ 0.6
PDLIM4-202ENST00000379018 GNSP15586 552 aa18.8■□□□□ 0.6
PDLIM4-202ENST00000379018 PDCP20941 246 aa18.8■□□□□ 0.6
PDLIM4-202ENST00000379018 TUBP50607 506 aa18.8■□□□□ 0.6
PDLIM4-202ENST00000379018 MAP3K7CLP57077 242 aa18.8■□□□□ 0.6
PDLIM4-202ENST00000379018 ZNF667Q5HYK9 610 aa18.8■□□□□ 0.6
PDLIM4-202ENST00000379018 SYCP2LQ5T4T6 812 aa18.8■□□□□ 0.6
PDLIM4-202ENST00000379018 PAQR9Q6ZVX9 377 aa18.8■□□□□ 0.6
PDLIM4-202ENST00000379018 SDCBP2Q9H190 292 aa18.8■□□□□ 0.6
PDLIM4-202ENST00000379018 XYLT2Q9H1B5 865 aa18.8■□□□□ 0.6
PDLIM4-202ENST00000379018 FAM49BQ9NUQ9 324 aa18.8■□□□□ 0.6
PDLIM4-202ENST00000379018 LSM7Q9UK45 103 aaKnown RBP18.8■□□□□ 0.6
PDLIM4-202ENST00000379018 NUDT5Q9UKK9 219 aa18.8■□□□□ 0.6
PDLIM4-202ENST00000379018 NBEAQ8NFP9 2946 aa18.8■□□□□ 0.6
PDLIM4-202ENST00000379018 CACNG3O60359 315 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 BEST1O76090 585 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 FAM163BP0C2L3 166 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 ADORA2BP29275 332 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 ATICP31939 592 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 DGKGP49619 791 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 GRIK2Q13002 908 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 HNRNPDQ14103 355 aaKnown RBP18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 SLC39A14Q15043 492 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 STK38Q15208 465 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 SNX30Q5VWJ9 437 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 CACUL1Q86Y37 369 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 FUKQ8N0W3 1084 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 ZCCHC9Q8N567 271 aaKnown RBP18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 ZNF507Q8TCN5 953 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 SLC2A14Q8TDB8 520 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 TNIP3Q96KP6 325 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 MRGPRX1Q96LB2 322 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 SMOQ99835 787 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 LRRC27Q9C0I9 530 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 FAM124BQ9H5Z6 455 aaPredicted RBP18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 TLR8Q9NR97 1041 aaKnown RBP18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 FOXD4L1Q9NU39 408 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 SUSD2Q9UGT4 822 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 FREM2Q5SZK8 3169 aa18.79■□□□□ 0.6
PDLIM4-202ENST00000379018 CYP26A1O43174 497 aa18.78■□□□□ 0.6
PDLIM4-202ENST00000379018 EXOC3O60645 756 aa18.78■□□□□ 0.6
PDLIM4-202ENST00000379018 ZDHHC11BP0C7U3 371 aa18.78■□□□□ 0.6
PDLIM4-202ENST00000379018 SYT1P21579 422 aa18.78■□□□□ 0.6
PDLIM4-202ENST00000379018 CASP1P29466 404 aa18.78■□□□□ 0.6
PDLIM4-202ENST00000379018 GOLGA8FQ08AF8 430 aa18.78■□□□□ 0.6
PDLIM4-202ENST00000379018 GOLGA8DPQ0D2H9 430 aa18.78■□□□□ 0.6
PDLIM4-202ENST00000379018 WDR45BQ5MNZ6 344 aa18.78■□□□□ 0.6
PDLIM4-202ENST00000379018 EPM2AIP1Q7L775 607 aaPredicted RBP18.78■□□□□ 0.6
PDLIM4-202ENST00000379018 ZMIZ2Q8NF64 920 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms