RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 PTPAQ15257 358 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 PGS1Q32NB8 556 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 DCAF6Q58WW2 860 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 LRRC74BQ6ZQY2 392 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 CCDC36Q8IYA8 594 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 SETD9Q8NE22 299 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 BHMTQ93088 406 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 NSL1Q96IY1 281 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 VPS35Q96QK1 796 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 SENP7Q9BQF6 1050 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 GANQ9H2C0 597 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 KCTD10Q9H3F6 313 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 BSDC1Q9NW68 430 aaPredicted RBP10.95□□□□□ -0.66
RTN3-206ENST00000377819 TNFSF13BQ9Y275 285 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 ADCY9O60503 1353 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 PARD3Q8TEW0 1356 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 CYP2C8P10632 490 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 NCAM1P13591 858 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 GCLCP48506 637 aaPredicted RBP10.95□□□□□ -0.66
RTN3-206ENST00000377819 ZBTB49Q6ZSB9 765 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 C3orf62Q6ZUJ4 267 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 NAT9Q9BTE0 207 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 STOML2Q9UJZ1 356 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.95□□□□□ -0.66
RTN3-206ENST00000377819 ATP10DQ9P241 1426 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 EMSYQ7Z589 1322 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 G3V2T6 193 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 UBTFL6P0CB48 400 aaPredicted RBP10.94□□□□□ -0.66
RTN3-206ENST00000377819 PCNAP12004 261 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 IL6STP40189 918 aaPredicted RBP10.94□□□□□ -0.66
RTN3-206ENST00000377819 GRIK3Q13003 919 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 SMU1Q2TAY7 513 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 GALNTL6Q49A17 601 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 KCNT1Q5JUK3 1230 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 RD3Q7Z3Z2 195 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 FAM220AQ7Z4H9 259 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 PRPF39Q86UA1 669 aaKnown RBP10.94□□□□□ -0.66
RTN3-206ENST00000377819 CCNJLQ8IV13 435 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 ARID3BQ8IVW6 561 aaPredicted RBP10.94□□□□□ -0.66
RTN3-206ENST00000377819 PEX5LQ8IYB4 626 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 SSH3Q8TE77 659 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 RORBQ92753 470 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 PRRG4Q9BZD6 226 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 SH3GLB2Q9NR46 395 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 LRRC4BQ9NT99 713 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 TPRKBQ9Y3C4 175 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 NPATQ14207 1427 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 GSAPA4D1B5 854 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 KPNA4O00629 521 aaPredicted RBP10.94□□□□□ -0.66
RTN3-206ENST00000377819 RTN2O75298 545 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 ANXA6P08133 673 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 VHLP40337 213 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 DMPKQ09013 629 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 PREPLQ4J6C6 727 aaPredicted RBP10.94□□□□□ -0.66
RTN3-206ENST00000377819 BOLA3Q53S33 107 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 ZMYM1Q5SVZ6 1142 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 RGL4Q8IZJ4 473 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 CCDC185Q8N715 623 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 FAR1Q8WVX9 515 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 BHLHE41Q9C0J9 482 aaPredicted RBP10.94□□□□□ -0.66
RTN3-206ENST00000377819 GREM2Q9H772 168 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 SPEF1Q9Y4P9 236 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 SNX8Q9Y5X2 465 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 ASXL1Q8IXJ9 1541 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 MAGEA13PA6NCF6 341 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 F5H5T6 163 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 TCEA2Q15560 299 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 ZNHIT3Q15649 155 aaPredicted RBP10.94□□□□□ -0.66
RTN3-206ENST00000377819 XKR3Q5GH77 459 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 RIBC1Q8N443 379 aaPredicted RBP10.94□□□□□ -0.66
RTN3-206ENST00000377819 TMEM159Q96B96 161 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 C6orf62Q9GZU0 229 aaPredicted RBP10.94□□□□□ -0.66
RTN3-206ENST00000377819 NUAK2Q9H093 628 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 XPR1Q9UBH6 696 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 AMACRQ9UHK6 382 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 ATPIF1Q9UII2 106 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 NCKAP1Q9Y2A7 1128 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 FAM92AA1XBS5 289 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 TBKBP1A7MCY6 615 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 USP17L15C9J2P7 530 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 USP17L13C9JLJ4 530 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 USP17L11C9JVI0 530 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 USP17L18D6R9N7 530 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 USP17L22D6RA61 530 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 USP17L17D6RBQ6 530 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 USP17L19D6RCP7 530 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 USP17L20D6RJB6 530 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 DGAT1O75907 488 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 MTTPP55157 894 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 ABATP80404 500 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 USP17L24Q0WX57 530 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 MEA1Q16626 185 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 FGD3Q5JSP0 725 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 ZNF655Q8N720 491 aaPredicted RBP10.94□□□□□ -0.66
RTN3-206ENST00000377819 C1QTNF7Q9BXJ2 289 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 ADGRE3Q9BY15 652 aa10.94□□□□□ -0.66
RTN3-206ENST00000377819 TRIM49BA6NDI0 452 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 TRIM49D1C9J1S8 452 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 SLCO1B7G3V0H7 640 aa10.93□□□□□ -0.66
RTN3-206ENST00000377819 TIMM44O43615 452 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms