RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 TMEM9BQ9NQ34 198 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 FAM49BQ9NUQ9 324 aa15.57■□□□□ 0.08
HDAC6-204ENST00000376643 POLR3BQ9NW08 1133 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-204ENST00000376643 EVLQ9UI08 416 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-204ENST00000376643 CIZ1Q9ULV3 898 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-204ENST00000376643 ATG2BQ96BY7 2078 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 TPRP12270 2363 aaKnown RBP15.56■□□□□ 0.08
HDAC6-204ENST00000376643 FAM237AA0A1B0GTK4 181 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 A0A1W2PQ27 194 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 A0A1W2PQ64 194 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 A0A1W2PQD8 194 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 TM4SF5O14894 197 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 AP5Z1O43299 807 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 ZNF217O75362 1048 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 TULP3O75386 442 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 ADORA2BP29275 332 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 P2RY2P41231 377 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 PLA2G4AP47712 749 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 SHC2P98077 582 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 EDRF1Q3B7T1 1238 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 C10orf76Q5T2E6 689 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 KRT39Q6A163 491 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 ZNF276Q8N554 614 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 ZMIZ2Q8NF64 920 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 CEP76Q8TAP6 659 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 RMND1Q9NWS8 449 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 MARK1Q9P0L2 795 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 DNMT3LQ9UJW3 386 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 STARD13Q9Y3M8 1113 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 KIAA1549LQ6ZVL6 1849 aa15.56■□□□□ 0.08
HDAC6-204ENST00000376643 SDK1Q7Z5N4 2213 aa15.55■□□□□ 0.08
HDAC6-204ENST00000376643 TCRBV21S2A2A0A5A6 115 aa15.55■□□□□ 0.08
HDAC6-204ENST00000376643 SGK1O00141 431 aa15.55■□□□□ 0.08
HDAC6-204ENST00000376643 SCAMP3O14828 347 aaKnown RBP15.55■□□□□ 0.08
HDAC6-204ENST00000376643 NPC1O15118 1278 aa15.55■□□□□ 0.08
HDAC6-204ENST00000376643 CACNG3O60359 315 aa15.55■□□□□ 0.08
HDAC6-204ENST00000376643 IRF1P10914 325 aa15.55■□□□□ 0.08
HDAC6-204ENST00000376643 ACO1P21399 889 aaKnown RBP15.55■□□□□ 0.08
HDAC6-204ENST00000376643 NTSR1P30989 418 aa15.55■□□□□ 0.08
HDAC6-204ENST00000376643 ADAM9Q13443 819 aa15.55■□□□□ 0.08
HDAC6-204ENST00000376643 PKP1Q13835 747 aa15.55■□□□□ 0.08
HDAC6-204ENST00000376643 TMEM92Q6UXU6 159 aa15.55■□□□□ 0.08
HDAC6-204ENST00000376643 CLEC20AQ6ZU45 233 aa15.55■□□□□ 0.08
HDAC6-204ENST00000376643 CCDC186Q7Z3E2 898 aa15.55■□□□□ 0.08
HDAC6-204ENST00000376643 C12orf40Q86WS4 652 aa15.55■□□□□ 0.08
HDAC6-204ENST00000376643 SYT12Q8IV01 421 aa15.55■□□□□ 0.08
HDAC6-204ENST00000376643 HMGB4Q8WW32 186 aa15.55■□□□□ 0.08
HDAC6-204ENST00000376643 BBS2Q9BXC9 721 aa15.55■□□□□ 0.08
HDAC6-204ENST00000376643 KLF16Q9BXK1 252 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-204ENST00000376643 DCLK3Q9C098 648 aa15.55■□□□□ 0.08
HDAC6-204ENST00000376643 DNAJC17Q9NVM6 304 aaKnown RBP15.55■□□□□ 0.08
HDAC6-204ENST00000376643 ACACBO00763 2458 aa15.55■□□□□ 0.08
HDAC6-204ENST00000376643 LNP1A1A4G5 178 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 NEDD8-MDP1E9PL57 170 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 CILPO75339 1184 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 KCNK5O95279 499 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 EPB41P11171 864 aaKnown RBP15.54■□□□□ 0.08
HDAC6-204ENST00000376643 HOXB2P14652 356 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 PMLP29590 882 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 CHKAP35790 457 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 GCLMP48507 274 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 NOVA1P51513 510 aaKnown RBP15.54■□□□□ 0.08
HDAC6-204ENST00000376643 NDUFA8P51970 172 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 ZNF132P52740 706 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 COG7P83436 770 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 DPYDQ12882 1025 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 ST3GAL2Q16842 350 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 C10orf120Q5SQS8 335 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 LYSMD4Q5XG99 296 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 SPOPLQ6IQ16 392 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 KRBA2Q6ZNG9 492 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 CHPFQ8IZ52 775 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 PHTF2Q8N3S3 785 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 C12orf29Q8N999 325 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 PIGKQ92643 395 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 SMOC1Q9H4F8 434 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 RXFP3Q9NSD7 469 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 CLIC5Q9NZA1 410 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 STRIP2Q9ULQ0 834 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 MYO16Q9Y6X6 1858 aa15.54■□□□□ 0.08
HDAC6-204ENST00000376643 C4orf47A7E2U8 309 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 GFRA2O00451 464 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 CETN3O15182 167 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 BEST1O76090 585 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 RARGP13631 454 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 TYRP14679 529 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 CSRP1P21291 193 aaKnown RBP15.53■□□□□ 0.08
HDAC6-204ENST00000376643 BCKDHBP21953 392 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 DGKGP49619 791 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 MXI1P50539 228 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 KIF11P52732 1056 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 ATXN3P54252 364 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-204ENST00000376643 YWHAEP62258 255 aaKnown RBP15.53■□□□□ 0.08
HDAC6-204ENST00000376643 N4BP2L1Q5TBK1 243 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-204ENST00000376643 TCEAL6Q6IPX3 200 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 TMEM25Q86YD3 366 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 NAT16Q8N8M0 369 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 SPRYD3Q8NCJ5 442 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 FBXL13Q8NEE6 735 aa15.53■□□□□ 0.08
HDAC6-204ENST00000376643 TAS1R2Q8TE23 839 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms