RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CPT1BQ92523 772 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 RNF39Q9H2S5 420 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 EURLQ9NYK6 297 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 HESX1Q9UBX0 185 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 PIN4Q9Y237 131 aaKnown RBP14.56□□□□□ -0.08
MSH5-202ENST00000375740 SMIM28A0A1B0GU29 152 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 NDC80O14777 642 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 BANF1O75531 89 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 MYL3P08590 195 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 PDGFRBP09619 1106 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 RBP3P10745 1247 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 GCAP28676 217 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 BEX3Q00994 111 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 DPYSL3Q14195 570 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 SNX17Q15036 470 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 ANKMY2Q8IV38 441 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 PPIL6Q8IXY8 311 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 ANKRD42Q8N9B4 389 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 GDAP1Q8TB36 358 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 SPATA18Q8TC71 538 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 DYDC1Q8WWB3 177 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 B3GNT5Q9BYG0 378 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 NSRP1Q9H0G5 558 aaKnown RBP14.56□□□□□ -0.08
MSH5-202ENST00000375740 VPS37BQ9H9H4 285 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 RRAGCQ9HB90 399 aa14.56□□□□□ -0.08
MSH5-202ENST00000375740 UBQLN1Q9UMX0 589 aaKnown RBP14.56□□□□□ -0.08
MSH5-202ENST00000375740 TRIP12Q14669 1992 aaPredicted RBP14.55□□□□□ -0.08
MSH5-202ENST00000375740 EXOC1LA0A1B0GW35 172 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 PAPSS1O43252 624 aaPredicted RBP14.55□□□□□ -0.08
MSH5-202ENST00000375740 NRLP54845 237 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 PCBP1Q15365 356 aaKnown RBP eCLIP14.55□□□□□ -0.088e-7■■■■□ 25
MSH5-202ENST00000375740 CGB2Q6NT52 195 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 UNC93AQ86WB7 457 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 SRRM1Q8IYB3 904 aaKnown RBP14.55□□□□□ -0.08
MSH5-202ENST00000375740 NAT8LQ8N9F0 302 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 TEKT4Q8WW24 435 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 MAML1Q92585 1016 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 ETNK1Q9HBU6 452 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 NGRNQ9NPE2 291 aaKnown RBP14.55□□□□□ -0.08
MSH5-202ENST00000375740 GPATCH2LQ9NWQ4 482 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 POC1B-GALNT4F8VUJ3 575 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 HAS3O00219 553 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 PIRO00625 290 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 MCF2LO15068 1137 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 SUN1O94901 812 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 RTN3O95197 1032 aaPredicted RBP14.55□□□□□ -0.08
MSH5-202ENST00000375740 SETSIPP0DME0 302 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 AXLP30530 894 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 MXRA7P84157 204 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 ADCY1Q08828 1119 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 TMED2Q15363 201 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 FNBP1LQ5T0N5 605 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 ZC3H18Q86VM9 953 aaKnown RBP14.55□□□□□ -0.08
MSH5-202ENST00000375740 SESTD1Q86VW0 696 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 PLCD4Q9BRC7 762 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 LRRC42Q9Y546 428 aa14.55□□□□□ -0.08
MSH5-202ENST00000375740 TCRBV7S3A2A0A539 114 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 DPYSL4O14531 572 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 SPTLC1O15269 473 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 FGFR1P11362 822 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 CYP2B6P20813 491 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 IL4RP24394 825 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 LMO2P25791 158 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 KRT81Q14533 505 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 HIF1AQ16665 826 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 TBC1D25Q3MII6 688 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 MSS51Q4VC12 460 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 ZC3H12AQ5D1E8 599 aaKnown RBP14.54□□□□□ -0.08
MSH5-202ENST00000375740 FBXO47Q5MNV8 452 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 UBXN11Q5T124 520 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 RNF220Q5VTB9 566 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 CST9Q5W186 159 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 ARHGAP17Q68EM7 881 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 DARS2Q6PI48 645 aaKnown RBP14.54□□□□□ -0.08
MSH5-202ENST00000375740 C1orf228Q6PIY5 440 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 PHC3Q8NDX5 983 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 FAM172AQ8WUF8 416 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 RNF157Q96PX1 679 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 TMEM237Q96Q45 408 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 ZNF236Q9UL36 1845 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 KPNA7A9QM74 516 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 H0Y3Z8 333 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 LUC7L3O95232 432 aaKnown RBP14.54□□□□□ -0.08
MSH5-202ENST00000375740 CD4P01730 458 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 PYGLP06737 847 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 ADORA2BP29275 332 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 SDC4P31431 198 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 GNL1P36915 607 aaPredicted RBP14.54□□□□□ -0.08
MSH5-202ENST00000375740 TFDP2Q14188 446 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 NOMO1Q15155 1222 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 SLC5A9Q2M3M2 681 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 BOLA3Q53S33 107 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 ZNF618Q5T7W0 954 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 SPATA21Q7Z572 469 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 KBTBD7Q8WVZ9 684 aa14.54□□□□□ -0.08
MSH5-202ENST00000375740 PEX11AO75192 247 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 CCDC130P13994 396 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 ARL4CP56559 192 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 GPX6P59796 221 aa14.53□□□□□ -0.08
MSH5-202ENST00000375740 FAM47CQ5HY64 1035 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms