RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 DDI1Q8WTU0 396 aa18.58■□□□□ 0.57
PTPDC1-202ENST00000375360 UPF1Q92900 1129 aaKnown RBP eCLIP18.58■□□□□ 0.57
PTPDC1-202ENST00000375360 NT5MQ9NPB1 228 aa18.58■□□□□ 0.57
PTPDC1-202ENST00000375360 PSMD3O43242 534 aa18.58■□□□□ 0.56
PTPDC1-202ENST00000375360 SERPINB9P50453 376 aa18.58■□□□□ 0.56
PTPDC1-202ENST00000375360 ANKRD23Q86SG2 305 aa18.58■□□□□ 0.56
PTPDC1-202ENST00000375360 MAFBQ9Y5Q3 323 aaPredicted RBP18.58■□□□□ 0.56
PTPDC1-202ENST00000375360 SMAPO00193 183 aa18.58■□□□□ 0.56
PTPDC1-202ENST00000375360 ANXA9O76027 345 aa18.58■□□□□ 0.56
PTPDC1-202ENST00000375360 LTFP02788 710 aa18.58■□□□□ 0.56
PTPDC1-202ENST00000375360 SMPD1P17405 629 aa18.58■□□□□ 0.56
PTPDC1-202ENST00000375360 HADHAP40939 763 aa18.58■□□□□ 0.56
PTPDC1-202ENST00000375360 HGSNATQ68CP4 663 aa18.58■□□□□ 0.56
PTPDC1-202ENST00000375360 BRI3BPQ8WY22 251 aa18.58■□□□□ 0.56
PTPDC1-202ENST00000375360 ALG3Q92685 438 aa18.58■□□□□ 0.56
PTPDC1-202ENST00000375360 ENTPD7Q9NQZ7 604 aa18.58■□□□□ 0.56
PTPDC1-202ENST00000375360 ZNF536O15090 1300 aa18.58■□□□□ 0.56
PTPDC1-202ENST00000375360 FRMD3A2A2Y4 597 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 SDR42E2A6NKP2 422 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 CBX4O00257 560 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 ETS1P14921 441 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 IMPG1Q17R60 797 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 ZRANB3Q5FWF4 1079 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 FSCBQ5H9T9 825 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 HELQQ8TDG4 1101 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 SHCBP1LQ9BZQ2 653 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 BRCC3P46736 316 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 SP2Q02086 613 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 BMPR2Q13873 1038 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 C12orf56Q8IXR9 622 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 SERPINB12Q96P63 405 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 CINPQ9BW66 212 aaPredicted RBP18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 BAZ2AQ9UIF9 1905 aaKnown RBP18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 AP3B1O00203 1094 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 SASH3O75995 380 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 RBL1P28749 1068 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 FDFT1P37268 417 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 SDHAF4Q5VUM1 108 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 ARL2BPQ9Y2Y0 163 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 F8W8V4 182 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 GNGT2O14610 69 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 SMIM24O75264 130 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 CHRM3P20309 590 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 CRYBB1P53674 252 aaPredicted RBP18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 SPIRE1Q08AE8 756 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 ELAVL2Q12926 359 aaKnown RBP18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 CES3Q6UWW8 571 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 CARNMT1Q8N4J0 409 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 B3GALNT2Q8NCR0 500 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 PPP2R3CQ969Q6 453 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 SPDL1Q96EA4 605 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 FAM161BQ96MY7 647 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 FAM105AQ9NUU6 356 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 TUBGCP4Q9UGJ1 667 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 C2CD2Q9Y426 696 aa18.57■□□□□ 0.56
PTPDC1-202ENST00000375360 CNTNAP1P78357 1384 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 SIGLEC16A6NMB1 481 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 STX7O15400 261 aaKnown RBP18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 TSPAN3O60637 253 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 DARSP14868 501 aaKnown RBP18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 YBX3P16989 372 aaKnown RBP eCLIP18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 ELK3P41970 407 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 TUBP50607 506 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 GRAMD1BQ3KR37 738 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 FAM183BPQ6ZVS7 135 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 MBOAT7Q96N66 472 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 B3GNT5Q9BYG0 378 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 PCDH9Q9HC56 1237 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 O00370 1275 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 PPP1R26Q5T8A7 1209 aaPredicted RBP18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 DCUN1D1Q96GG9 259 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 NIFKQ9BYG3 293 aaKnown RBP18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 TKTL2Q9H0I9 626 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 ECT2Q9H8V3 914 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 CACYBPQ9HB71 228 aaKnown RBP18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 RAB21Q9UL25 225 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 USP15Q9Y4E8 981 aaPredicted RBP18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 SYF2O95926 243 aaKnown RBP18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 ICAM3P32942 547 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 ARL2P36404 184 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 NPNTQ6UXI9 565 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 DEFB118Q96PH6 123 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 TBCBQ99426 244 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 IRAK4Q9NWZ3 460 aa18.56■□□□□ 0.56
PTPDC1-202ENST00000375360 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.55■□□□□ 0.56
PTPDC1-202ENST00000375360 PIAS1O75925 651 aa18.55■□□□□ 0.56
PTPDC1-202ENST00000375360 MYL4P12829 197 aa18.55■□□□□ 0.56
PTPDC1-202ENST00000375360 KDELR1P24390 212 aa18.55■□□□□ 0.56
PTPDC1-202ENST00000375360 AVPR1AP37288 418 aa18.55■□□□□ 0.56
PTPDC1-202ENST00000375360 SCNN1BP51168 640 aa18.55■□□□□ 0.56
PTPDC1-202ENST00000375360 MMRN1Q13201 1228 aa18.55■□□□□ 0.56
PTPDC1-202ENST00000375360 POU6F1Q14863 301 aa18.55■□□□□ 0.56
PTPDC1-202ENST00000375360 ERP27Q96DN0 273 aa18.55■□□□□ 0.56
PTPDC1-202ENST00000375360 SEC16BQ96JE7 1060 aa18.55■□□□□ 0.56
PTPDC1-202ENST00000375360 PAFAH2Q99487 392 aa18.55■□□□□ 0.56
PTPDC1-202ENST00000375360 ADA2Q9NZK5 511 aa18.55■□□□□ 0.56
PTPDC1-202ENST00000375360 VPS28Q9UK41 221 aa18.55■□□□□ 0.56
PTPDC1-202ENST00000375360 YWHAQP27348 245 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms