RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 SHOC2Q9UQ13 582 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 BCL9LQ86UU0 1499 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 PTGIRP43119 386 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 MAP3K7CLP57077 242 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 NBPF20Q3BBV1 942 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 ZNF772Q68DY9 489 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-202ENST00000375340 BNC2Q6ZN30 1099 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-202ENST00000375340 ZNF786Q8N393 782 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 GIPC2Q8TF65 315 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 DACT3Q96B18 629 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-202ENST00000375340 EPAS1Q99814 870 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 SLIT2O94813 1529 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 NR5A2O00482 541 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 USP1O94782 785 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 UNC5CO95185 931 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 ERVK-10P10266 1014 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 BBS5Q8N3I7 341 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 CNDP1Q96KN2 507 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 SNED1Q8TER0 1413 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 LACTBL1A8MY62 500 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 IRF1P10914 325 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 MAP4K3Q8IVH8 894 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 KCTD17Q8N5Z5 321 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 EGFL8Q99944 293 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 DEFB129Q9H1M3 183 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 FBXO6Q9NRD1 293 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-202ENST00000375340 LRFN2Q9ULH4 789 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 TPST1O60507 370 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 KCNA2P16389 499 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 FECHP22830 423 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 FDFT1P37268 417 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 MARSP56192 900 aaKnown RBP6.76□□□□□ -1.33
SMC1A-202ENST00000375340 MAPRE2Q15555 327 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 OASLQ15646 514 aaKnown RBP6.76□□□□□ -1.33
SMC1A-202ENST00000375340 KBTBD12Q3ZCT8 623 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 GALNTL6Q49A17 601 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 FAM183BPQ6ZVS7 135 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 ADAM32Q8TC27 787 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 RNPEPQ9H4A4 650 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 LRRC19Q9H756 370 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 PTPRHQ9HD43 1115 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 STXBP5LQ9Y2K9 1186 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 SNX13Q9Y5W8 968 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 PKD1L3Q7Z443 1732 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 ANKRD36CQ5JPF3 1778 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 VWA5AO00534 786 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 PTGER2P43116 358 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 SLC25A3Q00325 362 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 BMT2Q1RMZ1 405 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 IYDQ6PHW0 289 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 FAM131BQ86XD5 332 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 ABI1Q8IZP0 508 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 RMDN1Q96DB5 314 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 PABPC5Q96DU9 382 aaKnown RBP6.76□□□□□ -1.33
SMC1A-202ENST00000375340 CELF6Q96J87 481 aaKnown RBP6.76□□□□□ -1.33
SMC1A-202ENST00000375340 FICDQ9BVA6 458 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 TBC1D10AQ9BXI6 508 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 FRMD8P1Q9BZ68 369 aaPredicted RBP6.76□□□□□ -1.33
SMC1A-202ENST00000375340 NDFIP2Q9NV92 336 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 ARL8BQ9NVJ2 186 aa6.76□□□□□ -1.33
SMC1A-202ENST00000375340 SAC3D1A6NKF1 404 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 MYO1GB0I1T2 1018 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 PMPCBO75439 489 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 MIPP30301 263 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 KYAT1Q16773 422 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 SLC35G1Q2M3R5 365 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 HYIQ5T013 277 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 TEDDM1Q5T9Z0 273 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 DTNBP1Q96EV8 351 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 DDX18Q9NVP1 670 aaKnown RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 STX18Q9P2W9 335 aaKnown RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 C2CD2Q9Y426 696 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 PCDHA11Q9Y5I1 949 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 OGTO15294 1046 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 RALBP11234 206 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 MAP4P27816 1152 aaKnown RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 NDST1P52848 882 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 RFWD3Q6PCD5 774 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 POLNQ7Z5Q5 900 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 CCDC60Q8IWA6 550 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 RDM1Q8NG50 284 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 BSNDQ8WZ55 320 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 DDX50Q9BQ39 737 aaKnown RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 C17orf75Q9HAS0 396 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 TSPAN16Q9UKR8 245 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 TRUB2O95900 331 aaKnown RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 MT-CO1P00395 513 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 CHRNB2P17787 502 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 KDELR1P24390 212 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 PDK2Q15119 407 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 SGO1Q5FBB7 561 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 LAMB1P07942 1786 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 ITGB4P16144 1822 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 UPP2O95045 317 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 GJB1P08034 283 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 PTPN11Q06124 597 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 SPATA2LQ8IUW3 424 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-202ENST00000375340 MIER2Q8N344 545 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 FAM162AQ96A26 154 aa6.75□□□□□ -1.33
SMC1A-202ENST00000375340 TRPC7Q9HCX4 862 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms