RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 TMED10P49755 219 aaKnown RBP12.62□□□□□ -0.39
C9orf3-203ENST00000375315 CCNA1P78396 465 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 HTRA3P83110 453 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 NCOA4Q13772 614 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 HIC1Q14526 733 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 GRAMD1BQ3KR37 738 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 SYCP2LQ5T4T6 812 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 LMBRD2Q68DH5 695 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-203ENST00000375315 ABHD15Q6UXT9 468 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 CENPUQ71F23 418 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 ERI1Q8IV48 349 aaKnown RBP12.62□□□□□ -0.39
C9orf3-203ENST00000375315 CASP10Q92851 521 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 SNX27Q96L92 541 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 AGPAT1Q99943 283 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 POLR3FQ9H1D9 316 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-203ENST00000375315 KCNK13Q9HB14 408 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 SAYSD1Q9NPB0 183 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 CHST7Q9NS84 486 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 ZNHIT2Q9UHR6 403 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 SLC24A2Q9UI40 661 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 NR2E3Q9Y5X4 410 aa12.62□□□□□ -0.39
C9orf3-203ENST00000375315 RLFQ13129 1914 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 OTOFQ9HC10 1997 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 A0A1W2PPM1 405 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 FBP2O00757 339 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 FARP2O94887 1054 aaPredicted RBP12.61□□□□□ -0.39
C9orf3-203ENST00000375315 NCKAP1LP55160 1127 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 HDAC4P56524 1084 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 GPR142Q7Z601 462 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 C4orf19Q8IY42 314 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 SLC26A7Q8TE54 656 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 JADE3Q92613 823 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 ITPKCQ96DU7 683 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 PHF12Q96QT6 1004 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 NACA2Q9H009 215 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 VPS37BQ9H9H4 285 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 CYP26B1Q9NR63 512 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 HEY1Q9Y5J3 304 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 ARHGAP42A6NI28 874 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 PDXKO00764 312 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 PEX1O43933 1283 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 DLDP09622 509 aaKnown RBP12.61□□□□□ -0.39
C9orf3-203ENST00000375315 PMLP29590 882 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 NR1H2P55055 460 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 KDSRQ06136 332 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 ITGA7Q13683 1181 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 LLGL1Q15334 1064 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 TMEM132AQ24JP5 1023 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 FBXL19Q6PCT2 694 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 PALB2Q86YC2 1186 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 SCAIQ8N9R8 606 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 COX4I2Q96KJ9 171 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 MAK16Q9BXY0 300 aaKnown RBP12.61□□□□□ -0.39
C9orf3-203ENST00000375315 SENP6Q9GZR1 1112 aaPredicted RBP12.61□□□□□ -0.39
C9orf3-203ENST00000375315 TSC22D4Q9Y3Q8 395 aa12.61□□□□□ -0.39
C9orf3-203ENST00000375315 SOCS7O14512 581 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 DENRO43583 198 aaKnown RBP12.6□□□□□ -0.39
C9orf3-203ENST00000375315 MYCP01106 439 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-203ENST00000375315 FDFT1P37268 417 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 NPTX2P47972 431 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 DMP1Q13316 513 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-203ENST00000375315 TMC7Q7Z402 723 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 ANKS1BQ7Z6G8 1248 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 ZNF410Q86VK4 478 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 ZCCHC9Q8N567 271 aaKnown RBP12.6□□□□□ -0.39
C9orf3-203ENST00000375315 ATG4AQ8WYN0 398 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 MRRFQ96E11 262 aaKnown RBP12.6□□□□□ -0.39
C9orf3-203ENST00000375315 DHRS1Q96LJ7 313 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 PPARGC1AQ9UBK2 798 aaKnown RBP12.6□□□□□ -0.39
C9orf3-203ENST00000375315 DOCK3Q8IZD9 2030 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 GAP43P17677 238 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 GHRHRQ02643 423 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 TBCCQ15814 346 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 CCL14Q16627 93 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 CLPPQ16740 277 aaPredicted RBP12.6□□□□□ -0.39
C9orf3-203ENST00000375315 AHI1Q8N157 1196 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 GSTCDQ8NEC7 633 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 ALKBH8Q96BT7 664 aaKnown RBP12.6□□□□□ -0.39
C9orf3-203ENST00000375315 MROH8Q9H579 483 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 UVRAGQ9P2Y5 699 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 ADAMTS6Q9UKP5 1117 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 FAM32AQ9Y421 112 aaKnown RBP12.6□□□□□ -0.39
C9orf3-203ENST00000375315 DTNAQ9Y4J8 743 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 KIAA1217Q5T5P2 1943 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 MTA2O94776 668 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 GSTT2P0CG29 244 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 GSTT2BP0CG30 244 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 VCPP55072 806 aaKnown RBP12.6□□□□□ -0.39
C9orf3-203ENST00000375315 BTKQ06187 659 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 C16orf72Q14CZ0 275 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 NOP9Q86U38 636 aaKnown RBP12.6□□□□□ -0.39
C9orf3-203ENST00000375315 ALLCQ8N6M5 410 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 FBXO27Q8NI29 283 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 TCP10LQ8TDR4 215 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 AFG1LQ8WV93 481 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 SEPT1Q8WYJ6 367 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 NLRP4Q96MN2 994 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 GCNAQ96QF7 691 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 FIZ1Q96SL8 496 aa12.6□□□□□ -0.39
C9orf3-203ENST00000375315 PCYT2Q99447 389 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms