RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 EIF4BP23588 611 aaKnown RBP11.9□□□□□ -0.5
PTCH1-203ENST00000375274 MARSP56192 900 aaKnown RBP11.9□□□□□ -0.5
PTCH1-203ENST00000375274 LAMC2Q13753 1193 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 APOBEC3HQ6NTF7 200 aaKnown RBP11.9□□□□□ -0.5
PTCH1-203ENST00000375274 ZBTB49Q6ZSB9 765 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 GPR141Q7Z602 305 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 GCNAQ96QF7 691 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 MMADHCQ9H3L0 296 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-203ENST00000375274 COG4Q9H9E3 785 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 ZNF212Q9UDV6 495 aa11.9□□□□□ -0.5
PTCH1-203ENST00000375274 AAR2Q9Y312 384 aaKnown RBP11.9□□□□□ -0.5
PTCH1-203ENST00000375274 MIPP30301 263 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 MAP3K10Q02779 954 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 PDK4Q16654 411 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 QPCTQ16769 361 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 ZCCHC23Q6ZST2 131 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 PLD3Q8IV08 490 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 TDRD5Q8NAT2 981 aaKnown RBP11.89□□□□□ -0.51
PTCH1-203ENST00000375274 SLCO1B3Q9NPD5 702 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 TRIM13O60858 407 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 F9P00740 461 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 CTSHP09668 335 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 TMED10P49755 219 aaKnown RBP11.89□□□□□ -0.51
PTCH1-203ENST00000375274 PEX5P50542 639 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 GEMP55040 296 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 RAD51Q06609 339 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 R3HDM1Q15032 1099 aaKnown RBP11.89□□□□□ -0.51
PTCH1-203ENST00000375274 SLC44A4Q53GD3 710 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 VPS50Q96JG6 964 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 ZBTB45Q96K62 511 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-203ENST00000375274 ECSITQ9BQ95 431 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 NRDE2Q9H7Z3 1164 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 TSPAN16Q9UKR8 245 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 FSCN2O14926 492 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 TGFB1I1O43294 461 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 FKBP9O95302 570 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 HIST1H2AGP0C0S8 130 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-203ENST00000375274 HIST1H2ADP20671 130 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 ATICP31939 592 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 FMO1Q01740 532 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 DMC1Q14565 340 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 TCHHL1Q5QJ38 904 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-203ENST00000375274 IL31Q6EBC2 164 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 FKBP9P1Q75LS8 142 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 BRSK2Q8IWQ3 736 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 MICU2Q8IYU8 434 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 HIST1H2AHQ96KK5 128 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 HIST1H2AJQ99878 128 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 H2AFJQ9BTM1 129 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 IDI2Q9BXS1 227 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 UBE2OQ9C0C9 1292 aaKnown RBP11.89□□□□□ -0.51
PTCH1-203ENST00000375274 LMCD1Q9NZU5 365 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 KLK14Q9P0G3 267 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 POLIQ9UNA4 740 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 SHOX2O60902 331 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-203ENST00000375274 ENTPD5O75356 428 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 PDE5AO76074 875 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 CHKAP35790 457 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 CLK1P49759 484 aaKnown RBP11.89□□□□□ -0.51
PTCH1-203ENST00000375274 MRPS15P82914 257 aaKnown RBP11.89□□□□□ -0.51
PTCH1-203ENST00000375274 DPYSL3Q14195 570 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 DCAF4L1Q3SXM0 396 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 ZPBP2Q6X784 338 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 KIAA2013Q8IYS2 634 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 SH3TC2Q8TF17 1288 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 C10orf88Q9H8K7 445 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 SAE1Q9UBE0 346 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-203ENST00000375274 SALL4Q9UJQ4 1053 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 PKP3Q9Y446 797 aa11.89□□□□□ -0.51
PTCH1-203ENST00000375274 MYO1GB0I1T2 1018 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 AGPSO00116 658 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 DCXO43602 365 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 AP1G2O75843 785 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 RHOBTB1O94844 696 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 PSMG1O95456 288 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 ZNF23P17027 643 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 GMPSP49915 693 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-203ENST00000375274 NUP107P57740 925 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 TTC23LQ6PF05 361 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 TAGAPQ8N103 731 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 STKLD1Q8NE28 680 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 MKL1Q969V6 931 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 PURBQ96QR8 312 aaKnown RBP11.88□□□□□ -0.51
PTCH1-203ENST00000375274 KCNK4Q9NYG8 393 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 ADGRA3Q8IWK6 1321 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 PROCP04070 461 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 ABHD2P08910 425 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 ETS1P14921 441 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 CHRM3P20309 590 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 CDH8P55286 799 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 BMT2Q1RMZ1 405 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 ATP13A4Q4VNC1 1196 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 MRNIPQ6NTE8 343 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 ZFPM1Q8IX07 1006 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 C2orf69Q8N8R5 385 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 DDHD1Q8NEL9 900 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 USP13Q92995 863 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-203ENST00000375274 TTYH3Q9C0H2 523 aa11.88□□□□□ -0.51
PTCH1-203ENST00000375274 BARX2Q9UMQ3 279 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-203ENST00000375274 GAKO14976 1311 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms