RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 SLCO1A2P46721 670 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 RGS7P49802 495 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 BEX3Q00994 111 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 UBXN11Q5T124 520 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 RNASEH2BQ5TBB1 312 aaKnown RBP8.55□□□□□ -1.04
UBR4-202ENST00000375224 TWF2Q6IBS0 349 aaKnown RBP8.55□□□□□ -1.04
UBR4-202ENST00000375224 PMF1Q6P1K2 205 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 GBP7Q8N8V2 638 aaPredicted RBP8.55□□□□□ -1.04
UBR4-202ENST00000375224 TMEM121Q9BTD3 319 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 SAYSD1Q9NPB0 183 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 FAM49BQ9NUQ9 324 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 INTS9Q9NV88 658 aaKnown RBP8.55□□□□□ -1.04
UBR4-202ENST00000375224 SLC38A7Q9NVC3 462 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 LGALS13Q9UHV8 139 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 IPPQ9Y573 584 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 ACTL7BQ9Y614 415 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 CFAP69A5D8W1 941 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 MDM4O15151 490 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 ALOX15BO15296 676 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 IGHA2P01877 340 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 CHN1P15882 459 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 TGM2P21980 687 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 PTPN9P43378 593 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 ARL4CP56559 192 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 IFI35P80217 286 aaPredicted RBP8.55□□□□□ -1.04
UBR4-202ENST00000375224 LONRF1Q17RB8 773 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 CCDC14Q49A88 953 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 MFSD14CQ5VZR4 134 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 P3H4Q92791 437 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 ARHGEF2Q92974 986 aaKnown RBP8.55□□□□□ -1.04
UBR4-202ENST00000375224 NACA2Q9H009 215 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 CHST12Q9NRB3 414 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.55□□□□□ -1.04
UBR4-202ENST00000375224 PAIP2BQ9ULR5 123 aaKnown RBP8.55□□□□□ -1.04
UBR4-202ENST00000375224 TRIP12Q14669 1992 aaPredicted RBP8.55□□□□□ -1.04
UBR4-202ENST00000375224 PFDN1O60925 122 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 SLC10A3P09131 477 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 WARSP23381 471 aaKnown RBP8.55□□□□□ -1.04
UBR4-202ENST00000375224 LRPAP1P30533 357 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 PHBP35232 272 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 RPL34P49207 117 aaKnown RBP8.55□□□□□ -1.04
UBR4-202ENST00000375224 MRPS6P82932 125 aaKnown RBP8.55□□□□□ -1.04
UBR4-202ENST00000375224 ROR1Q01973 937 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 HIC1Q14526 733 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 PPP1R21Q6ZMI0 780 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 SLC26A9Q7LBE3 791 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 LIMS2Q7Z4I7 341 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 SPATA18Q8TC71 538 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 TMEM40Q8WWA1 233 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 LENG1Q96BZ8 264 aaPredicted RBP8.55□□□□□ -1.04
UBR4-202ENST00000375224 RNF157Q96PX1 679 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 NGRNQ9NPE2 291 aaKnown RBP8.55□□□□□ -1.04
UBR4-202ENST00000375224 DNAJC17Q9NVM6 304 aaKnown RBP8.55□□□□□ -1.04
UBR4-202ENST00000375224 TRPV2Q9Y5S1 764 aa8.55□□□□□ -1.04
UBR4-202ENST00000375224 RASSF9O75901 435 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 TOMM70O94826 608 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 ZSCAN5DPP0CG00 497 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 RBP3P10745 1247 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 TSHRP16473 764 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 ZFXP17010 805 aaPredicted RBP8.54□□□□□ -1.04
UBR4-202ENST00000375224 SEC24CP53992 1094 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 GJA9P57773 515 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 IFT88Q13099 833 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 DPYSL3Q14195 570 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 NOMO1Q15155 1222 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 EFHC1Q5JVL4 640 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 SCYL2Q6P3W7 929 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 DARS2Q6PI48 645 aaKnown RBP8.54□□□□□ -1.04
UBR4-202ENST00000375224 C4orf22Q6V702 233 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 CPLX4Q7Z7G2 160 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 TDRPQ86YL5 185 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 FAM172AQ8WUF8 416 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 CHMP6Q96FZ7 201 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 NSRP1Q9H0G5 558 aaKnown RBP8.54□□□□□ -1.04
UBR4-202ENST00000375224 ZCWPW1Q9H0M4 648 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 CCDC134Q9H6E4 229 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 LRRC4CQ9HCJ2 640 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 KLK14Q9P0G3 267 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.54□□□□□ -1.04
UBR4-202ENST00000375224 APOL1O14791 398 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 PAPSS1O43252 624 aaPredicted RBP8.54□□□□□ -1.04
UBR4-202ENST00000375224 C6orf222P0C671 652 aaPredicted RBP8.54□□□□□ -1.04
UBR4-202ENST00000375224 ETS1P14921 441 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 CTCFP49711 727 aaPredicted RBP8.54□□□□□ -1.04
UBR4-202ENST00000375224 ZNF200P98182 395 aaPredicted RBP8.54□□□□□ -1.04
UBR4-202ENST00000375224 HIF1AQ16665 826 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 CDO1Q16878 200 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 C15orf59Q2T9L4 293 aaPredicted RBP8.54□□□□□ -1.04
UBR4-202ENST00000375224 EXOC3L1Q86VI1 746 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 ADGRF2Q8IZF7 708 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 KBTBD7Q8WVZ9 684 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 PRCCQ92733 491 aaPredicted RBP8.54□□□□□ -1.04
UBR4-202ENST00000375224 C9orf72Q96LT7 481 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 PEBP4Q96S96 227 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 ZNF670Q9BS34 389 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 FRMD8Q9BZ67 464 aaPredicted RBP8.54□□□□□ -1.04
UBR4-202ENST00000375224 CXCL16Q9H2A7 254 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 UBAP1Q9NZ09 502 aa8.54□□□□□ -1.04
UBR4-202ENST00000375224 FARP1Q9Y4F1 1045 aaPredicted RBP8.54□□□□□ -1.04
UBR4-202ENST00000375224 C5orf60A6NFR6 353 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms