RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 ARSAP15289 507 aa22.02■■□□□ 1.12
MAP1LC3A-202ENST00000374837 STAT1P42224 750 aa22.02■■□□□ 1.12
MAP1LC3A-202ENST00000374837 ACADSBP45954 432 aa22.02■■□□□ 1.12
MAP1LC3A-202ENST00000374837 PDGFRLQ15198 375 aa22.02■■□□□ 1.12
MAP1LC3A-202ENST00000374837 BSPRYQ5W0U4 402 aa22.02■■□□□ 1.12
MAP1LC3A-202ENST00000374837 TPRG1Q6ZUI0 275 aa22.02■■□□□ 1.12
MAP1LC3A-202ENST00000374837 DDX42Q86XP3 938 aaKnown RBP eCLIP22.02■■□□□ 1.12
MAP1LC3A-202ENST00000374837 PASD1Q8IV76 773 aa22.02■■□□□ 1.12
MAP1LC3A-202ENST00000374837 DDX1Q92499 740 aaKnown RBP22.02■■□□□ 1.12
MAP1LC3A-202ENST00000374837 SPAG5Q96R06 1193 aa22.02■■□□□ 1.12
MAP1LC3A-202ENST00000374837 DDX23Q9BUQ8 820 aaKnown RBP22.02■■□□□ 1.12
MAP1LC3A-202ENST00000374837 MIS12Q9H081 205 aa22.02■■□□□ 1.12
MAP1LC3A-202ENST00000374837 EBF3Q9H4W6 596 aa22.02■■□□□ 1.12
MAP1LC3A-202ENST00000374837 DNMT3LQ9UJW3 386 aa22.02■■□□□ 1.12
MAP1LC3A-202ENST00000374837 WNT6Q9Y6F9 365 aa22.02■■□□□ 1.12
MAP1LC3A-202ENST00000374837 OBSL1O75147 1896 aa22.02■■□□□ 1.12
MAP1LC3A-202ENST00000374837 DENND4CQ5VZ89 1909 aa22.02■■□□□ 1.11
MAP1LC3A-202ENST00000374837 SHISA7A6NL88 538 aa22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 STK25O00506 426 aa22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 FBXO21O94952 628 aa22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 CD72P21854 359 aa22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 IFNAR2P48551 515 aa22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 RUNX3Q13761 415 aa22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 TAF3Q5VWG9 929 aa22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 BTBD8Q5XKL5 378 aa22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 CWF19L1Q69YN2 538 aaKnown RBP22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 TADA2BQ86TJ2 420 aa22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 TMEM110Q86TL2 294 aa22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 NOP9Q86U38 636 aaKnown RBP22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 SCUBE3Q8IX30 993 aa22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 CLEC4CQ8WTT0 213 aa22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 IRGQQ8WZA9 623 aa22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 WBP2Q969T9 261 aa22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 CDK5RAP1Q96SZ6 601 aaKnown RBP22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 PIAS3Q9Y6X2 628 aa22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 PATJQ8NI35 1801 aa22.01■■□□□ 1.11
MAP1LC3A-202ENST00000374837 NUP210Q8TEM1 1887 aaPredicted RBP22■■□□□ 1.11
MAP1LC3A-202ENST00000374837 ZNF318Q5VUA4 2279 aa22■■□□□ 1.11
MAP1LC3A-202ENST00000374837 ANAPC1Q9H1A4 1944 aa22■■□□□ 1.11
MAP1LC3A-202ENST00000374837 ZNF638Q14966 1978 aaKnown RBP22■■□□□ 1.11
MAP1LC3A-202ENST00000374837 A0A1W2PQC6 194 aa22■■□□□ 1.11
MAP1LC3A-202ENST00000374837 SCAMP3O14828 347 aaKnown RBP22■■□□□ 1.11
MAP1LC3A-202ENST00000374837 SOX9P48436 509 aa22■■□□□ 1.11
MAP1LC3A-202ENST00000374837 KPNA1P52294 538 aaPredicted RBP22■■□□□ 1.11
MAP1LC3A-202ENST00000374837 MLLT6P55198 1093 aaPredicted RBP22■■□□□ 1.11
MAP1LC3A-202ENST00000374837 UBASH3AP57075 661 aa22■■□□□ 1.11
MAP1LC3A-202ENST00000374837 EFEMP1Q12805 493 aa22■■□□□ 1.11
MAP1LC3A-202ENST00000374837 PDCLQ13371 301 aa22■■□□□ 1.11
MAP1LC3A-202ENST00000374837 EML3Q32P44 896 aa22■■□□□ 1.11
MAP1LC3A-202ENST00000374837 ITPRIPL2Q3MIP1 535 aa22■■□□□ 1.11
MAP1LC3A-202ENST00000374837 ASTLQ6HA08 431 aaPredicted RBP22■■□□□ 1.11
MAP1LC3A-202ENST00000374837 SUGP1Q8IWZ8 645 aaKnown RBP22■■□□□ 1.11
MAP1LC3A-202ENST00000374837 KIAA1958Q8N8K9 716 aa22■■□□□ 1.11
MAP1LC3A-202ENST00000374837 C8orf33Q9H7E9 229 aaPredicted RBP22■■□□□ 1.11
MAP1LC3A-202ENST00000374837 KANSL1LA0AUZ9 987 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 E2F8A0AVK6 867 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 OTOL1A6NHN0 477 aaPredicted RBP21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 E5RJQ4 531 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 PI15O43692 258 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 IRF1P10914 325 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 GLULP15104 373 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 CLCN5P51795 746 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 VCPP55072 806 aaKnown RBP21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 RSRC2Q7L4I2 434 aaKnown RBP21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 CACNA2D4Q7Z3S7 1137 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 C1orf131Q8NDD1 294 aaKnown RBP21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 EPS8L1Q8TE68 723 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 EDEM1Q92611 657 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 PPP1R13BQ96KQ4 1090 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 PHOX2BQ99453 314 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 FOXQ1Q9C009 403 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 PDCL3Q9H2J4 239 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 ABCC13Q9NSE7 274 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 TJP2Q9UDY2 1190 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 RASAL2Q9UJF2 1139 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 SH3BP1Q9Y3L3 701 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 MYH10P35580 1976 aa21.99■■□□□ 1.11
MAP1LC3A-202ENST00000374837 PAPSS1O43252 624 aaPredicted RBP21.98■■□□□ 1.11
MAP1LC3A-202ENST00000374837 GREM1O60565 184 aa21.98■■□□□ 1.11
MAP1LC3A-202ENST00000374837 AVPR2P30518 371 aa21.98■■□□□ 1.11
MAP1LC3A-202ENST00000374837 ZNF445P59923 1031 aa21.98■■□□□ 1.11
MAP1LC3A-202ENST00000374837 ZNF852Q6ZMS4 543 aa21.98■■□□□ 1.11
MAP1LC3A-202ENST00000374837 MIB1Q86YT6 1006 aa21.98■■□□□ 1.11
MAP1LC3A-202ENST00000374837 SLC20A1Q8WUM9 679 aa21.98■■□□□ 1.11
MAP1LC3A-202ENST00000374837 NOX5Q96PH1 765 aa21.98■■□□□ 1.11
MAP1LC3A-202ENST00000374837 CPXM1Q96SM3 734 aa21.98■■□□□ 1.11
MAP1LC3A-202ENST00000374837 ECT2Q9H8V3 914 aa21.98■■□□□ 1.11
MAP1LC3A-202ENST00000374837 MARCH2Q9P0N8 246 aa21.98■■□□□ 1.11
MAP1LC3A-202ENST00000374837 NOCTQ9UK39 431 aaKnown RBP21.98■■□□□ 1.11
MAP1LC3A-202ENST00000374837 MTF2Q9Y483 593 aaPredicted RBP21.98■■□□□ 1.11
MAP1LC3A-202ENST00000374837 SPECC1L-ADORA2AF8WAN1 911 aa21.97■■□□□ 1.11
MAP1LC3A-202ENST00000374837 MAN2B1O00754 1011 aa21.97■■□□□ 1.11
MAP1LC3A-202ENST00000374837 SLC9A3R1O14745 358 aaPredicted RBP21.97■■□□□ 1.11
MAP1LC3A-202ENST00000374837 LTFP02788 710 aa21.97■■□□□ 1.11
MAP1LC3A-202ENST00000374837 MMEP08473 750 aa21.97■■□□□ 1.11
MAP1LC3A-202ENST00000374837 AOC1P19801 751 aa21.97■■□□□ 1.11
MAP1LC3A-202ENST00000374837 CDH5P33151 784 aaPredicted RBP21.97■■□□□ 1.11
MAP1LC3A-202ENST00000374837 HTR3DQ70Z44 454 aa21.97■■□□□ 1.11
MAP1LC3A-202ENST00000374837 ZNF677Q86XU0 584 aa21.97■■□□□ 1.11
MAP1LC3A-202ENST00000374837 ADGRG2Q8IZP9 1017 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms