RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 CCDC91Q7Z6B0 441 aa17.74■□□□□ 0.43
RXRB-201ENST00000374680 CCDC125Q86Z20 511 aa17.74■□□□□ 0.43
RXRB-201ENST00000374680 GIMAP7Q8NHV1 300 aa17.74■□□□□ 0.43
RXRB-201ENST00000374680 KCNN1Q92952 543 aa17.74■□□□□ 0.43
RXRB-201ENST00000374680 UTP4Q969X6 686 aaKnown RBP17.74■□□□□ 0.43
RXRB-201ENST00000374680 MANSC1Q9H8J5 431 aa17.74■□□□□ 0.43
RXRB-201ENST00000374680 CFAP73A6NFT4 308 aa17.73■□□□□ 0.43
RXRB-201ENST00000374680 UNC5CO95185 931 aa17.73■□□□□ 0.43
RXRB-201ENST00000374680 ALDH3A1P30838 453 aa17.73■□□□□ 0.43
RXRB-201ENST00000374680 PITX1P78337 314 aaPredicted RBP17.73■□□□□ 0.43
RXRB-201ENST00000374680 TFDP2Q14188 446 aa17.73■□□□□ 0.43
RXRB-201ENST00000374680 KLHL38Q2WGJ6 581 aa17.73■□□□□ 0.43
RXRB-201ENST00000374680 C9orf131Q5VYM1 1079 aa17.73■□□□□ 0.43
RXRB-201ENST00000374680 RNF43Q68DV7 783 aa17.73■□□□□ 0.43
RXRB-201ENST00000374680 MAP7D3Q8IWC1 876 aa17.73■□□□□ 0.43
RXRB-201ENST00000374680 GPRC5AQ8NFJ5 357 aa17.73■□□□□ 0.43
RXRB-201ENST00000374680 KHSRPQ92945 711 aaKnown RBP eCLIP17.73■□□□□ 0.43
RXRB-201ENST00000374680 MROH8Q9H579 483 aa17.73■□□□□ 0.43
RXRB-201ENST00000374680 GBA2Q9HCG7 927 aaPredicted RBP17.73■□□□□ 0.43
RXRB-201ENST00000374680 STARD13Q9Y3M8 1113 aa17.73■□□□□ 0.43
RXRB-201ENST00000374680 ADCY6O43306 1168 aa17.73■□□□□ 0.43
RXRB-201ENST00000374680 SMPD1P17405 629 aa17.73■□□□□ 0.43
RXRB-201ENST00000374680 HDAC4P56524 1084 aa17.73■□□□□ 0.43
RXRB-201ENST00000374680 SOWAHAQ2M3V2 549 aa17.73■□□□□ 0.43
RXRB-201ENST00000374680 MARCH8Q5T0T0 291 aa17.73■□□□□ 0.43
RXRB-201ENST00000374680 MAMDC4Q6UXC1 1216 aa17.73■□□□□ 0.43
RXRB-201ENST00000374680 CTU1Q7Z7A3 348 aaKnown RBP17.73■□□□□ 0.43
RXRB-201ENST00000374680 GBP7Q8N8V2 638 aaPredicted RBP17.73■□□□□ 0.43
RXRB-201ENST00000374680 IQCGQ9H095 443 aaKnown RBP17.73■□□□□ 0.43
RXRB-201ENST00000374680 CYP3A43Q9HB55 503 aa17.73■□□□□ 0.43
RXRB-201ENST00000374680 ZMYND8Q9ULU4 1186 aaPredicted RBP17.73■□□□□ 0.43
RXRB-201ENST00000374680 A0A1B0GUA9 196 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 PDHXO00330 501 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 CLDN5O00501 218 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 CYP2F1P24903 491 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 CPA2P48052 419 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 YWHAZP63104 245 aaKnown RBP17.72■□□□□ 0.43
RXRB-201ENST00000374680 OLIG2Q13516 323 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 CES3Q6UWW8 571 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 CCDC185Q8N715 623 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 BANPQ8N9N5 519 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 ARMC2Q8NEN0 867 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 N4BP2L2Q92802 583 aaPredicted RBP17.72■□□□□ 0.43
RXRB-201ENST00000374680 ARHGEF3Q9NR81 526 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 SMYD2Q9NRG4 433 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 ARMCX1Q9P291 453 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 HEY2Q9UBP5 337 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 ZFP69BQ9UJL9 534 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 STIP1P31948 543 aaKnown RBP17.72■□□□□ 0.43
RXRB-201ENST00000374680 GABRB2P47870 512 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 PREPLQ4J6C6 727 aaPredicted RBP17.72■□□□□ 0.43
RXRB-201ENST00000374680 OLFML1Q6UWY5 402 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 FASTKD5Q7L8L6 764 aaKnown RBP17.72■□□□□ 0.43
RXRB-201ENST00000374680 TTC7BQ86TV6 843 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 LONP2Q86WA8 852 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 OR6J1Q8NGC5 347 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 ADAM32Q8TC27 787 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 NSMCE1Q8WV22 266 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 C10orf82Q8WW14 230 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 LGMNQ99538 433 aa17.72■□□□□ 0.43
RXRB-201ENST00000374680 MAGEB2O15479 319 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 SNAI1O95863 264 aaPredicted RBP17.71■□□□□ 0.43
RXRB-201ENST00000374680 ATICP31939 592 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 SLC6A3Q01959 620 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 PPIL2Q13356 520 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 ZCCHC23Q6ZST2 131 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 DENND5BQ6ZUT9 1274 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 TP53INP2Q8IXH6 220 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 GRAMD1AQ96CP6 724 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 SENP1Q9P0U3 644 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 EFR3BQ9Y2G0 817 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 TEX264Q9Y6I9 313 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 RECQL4O94761 1208 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 T-ENOLP0DO92 83 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 HOXA11P31270 313 aaPredicted RBP17.71■□□□□ 0.43
RXRB-201ENST00000374680 PCK1P35558 622 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 SESN2P58004 480 aaPredicted RBP17.71■□□□□ 0.43
RXRB-201ENST00000374680 KCNJ11Q14654 390 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 TAZQ16635 292 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 FYB2Q5VWT5 728 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 KCNT2Q6UVM3 1135 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 SLC2A14Q8TDB8 520 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 TSSK1BQ9BXA7 367 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 ITGA11Q9UKX5 1188 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 FAM237BA0A1B0GVD1 139 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 A6NJR5 290 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 SPTLC1O15269 473 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 CREB3O43889 395 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 GOT1P17174 413 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 CAND1Q86VP6 1230 aaKnown RBP17.71■□□□□ 0.43
RXRB-201ENST00000374680 MZB1Q8WU39 189 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 DNAJB3Q8WWF6 145 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 PCMTD2Q9NV79 361 aa17.71■□□□□ 0.43
RXRB-201ENST00000374680 NKX1-2Q9UD57 310 aaPredicted RBP17.71■□□□□ 0.43
RXRB-201ENST00000374680 PIN4Q9Y237 131 aaKnown RBP17.71■□□□□ 0.43
RXRB-201ENST00000374680 COPEO14579 308 aa17.7■□□□□ 0.42
RXRB-201ENST00000374680 ZWINTO95229 277 aa17.7■□□□□ 0.42
RXRB-201ENST00000374680 SERPINB3P29508 390 aa17.7■□□□□ 0.42
RXRB-201ENST00000374680 GTF2A2P52657 109 aa17.7■□□□□ 0.42
RXRB-201ENST00000374680 NME3Q13232 169 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms