RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 NEMP1O14524 444 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 TREHO43280 583 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 PMF1Q6P1K2 205 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 PIGZQ86VD9 579 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 SLC4A11Q8NBS3 891 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 SPOCK2Q92563 424 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 CCDC97Q96F63 343 aaPredicted RBP14.05□□□□□ -0.16
CLIC4-201ENST00000374379 FAM161BQ96MY7 647 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 FAM167BQ9BTA0 163 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 GOLGA8CPA6NN73 597 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 TULP2O00295 520 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 GIPC1O14908 333 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 TRUB2O95900 331 aaKnown RBP14.05□□□□□ -0.16
CLIC4-201ENST00000374379 OGDHQ02218 1023 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 PDK2Q15119 407 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 CCDC117Q8IWD4 279 aaPredicted RBP14.05□□□□□ -0.16
CLIC4-201ENST00000374379 SLC25A41Q8N5S1 370 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 GRAMD1AQ96CP6 724 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 SGF29Q96ES7 293 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 SLC12A6Q9UHW9 1150 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.05□□□□□ -0.16
CLIC4-201ENST00000374379 GPC4O75487 556 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 JCHAINP01591 159 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 USP17L7P0C7H9 530 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 RGS2P41220 211 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 PNPLA4P41247 253 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 ZNF143P52747 638 aaPredicted RBP14.05□□□□□ -0.16
CLIC4-201ENST00000374379 PDK1Q15118 436 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 TAF11Q15544 211 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 ANKRD22Q5VYY1 191 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 CCT6BQ92526 530 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 USP6NLQ92738 828 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 PGLYRP2Q96PD5 576 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 CCDC68Q9H2F9 335 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 DPEP3Q9H4B8 488 aa14.05□□□□□ -0.16
CLIC4-201ENST00000374379 SMPD1P17405 629 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 SCNN1GP51170 649 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 YWHAZP63104 245 aaKnown RBP14.04□□□□□ -0.16
CLIC4-201ENST00000374379 FSCN1Q16658 493 aaKnown RBP14.04□□□□□ -0.16
CLIC4-201ENST00000374379 XYLT1Q86Y38 959 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 LMNTD2Q8IXW0 634 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 RIBC1Q8N443 379 aaPredicted RBP14.04□□□□□ -0.16
CLIC4-201ENST00000374379 COLGALT1Q8NBJ5 622 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 GABPB2Q8TAK5 448 aaPredicted RBP14.04□□□□□ -0.16
CLIC4-201ENST00000374379 TMEM237Q96Q45 408 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 LRRC4CQ9HCJ2 640 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 C20orf96Q9NUD7 363 aaPredicted RBP14.04□□□□□ -0.16
CLIC4-201ENST00000374379 CPSF2Q9P2I0 782 aaKnown RBP14.04□□□□□ -0.16
CLIC4-201ENST00000374379 GOLGA4Q13439 2230 aaKnown RBP14.04□□□□□ -0.16
CLIC4-201ENST00000374379 LOC100653049A0A140TA62 436 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 PPEF2O14830 753 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 KRT34O76011 436 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 PCSK1P29120 753 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 GDF10P55107 478 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 ANKRD20A8PQ5CZ79 823 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 N4BP2L2Q92802 583 aaPredicted RBP14.04□□□□□ -0.16
CLIC4-201ENST00000374379 LGMNQ99538 433 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 SYT15Q9BQS2 421 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 ULBP1Q9BZM6 244 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 ATXN3LQ9H3M9 355 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 HEY2Q9UBP5 337 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 APOBEC2Q9Y235 224 aaKnown RBP14.04□□□□□ -0.16
CLIC4-201ENST00000374379 CILPO75339 1184 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 TADA2AO75478 443 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 C22orf31O95567 290 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 ETFBP38117 255 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 CDKN2BP42772 138 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 RPS6KA2Q15349 733 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 UBAP2Q5T6F2 1119 aaKnown RBP14.04□□□□□ -0.16
CLIC4-201ENST00000374379 IQSEC1Q6DN90 963 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 ZCCHC23Q6ZST2 131 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 BBS12Q6ZW61 710 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 BHMTQ93088 406 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 MAGEB18Q96M61 343 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 STRA6Q9BX79 667 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.04□□□□□ -0.16
CLIC4-201ENST00000374379 ATP8B3O60423 1300 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 PABPN1LA6NDY0 278 aaKnown RBP14.04□□□□□ -0.16
CLIC4-201ENST00000374379 GRIN3BO60391 1043 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 GOT1P17174 413 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 DRD4P21917 467 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 STX3Q13277 289 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 NLRP9Q7RTR0 991 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 MTDHQ86UE4 582 aaKnown RBP14.04□□□□□ -0.16
CLIC4-201ENST00000374379 FAM136AQ96C01 138 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 ZBED3Q96IU2 234 aaPredicted RBP14.04□□□□□ -0.16
CLIC4-201ENST00000374379 NUDCD1Q96RS6 583 aa14.04□□□□□ -0.16
CLIC4-201ENST00000374379 TSPAN1O60635 241 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 IL1R2P27930 398 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 ASPAP45381 313 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 FASTKD1Q53R41 847 aaKnown RBP14.03□□□□□ -0.16
CLIC4-201ENST00000374379 CYP4X1Q8N118 509 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 SENP8Q96LD8 212 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 RNF157Q96PX1 679 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 TTC1Q99614 292 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 SEPT5Q99719 369 aaPredicted RBP14.03□□□□□ -0.16
CLIC4-201ENST00000374379 FZD8Q9H461 694 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 SLC38A7Q9NVC3 462 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 CNTNAP2Q9UHC6 1331 aa14.03□□□□□ -0.16
CLIC4-201ENST00000374379 KIAA1551Q9HCM1 1747 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms