RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 MRPL47Q9HD33 250 aaKnown RBP14.94□□□□□ -0.02
HMGA1-203ENST00000374116 ENTPD7Q9NQZ7 604 aa14.94□□□□□ -0.02
HMGA1-203ENST00000374116 HIDE1A8MVS5 230 aa14.94□□□□□ -0.02
HMGA1-203ENST00000374116 LIN7AO14910 233 aaPredicted RBP14.94□□□□□ -0.02
HMGA1-203ENST00000374116 TRAPPC3O43617 180 aa14.94□□□□□ -0.02
HMGA1-203ENST00000374116 EFEMP2O95967 443 aa14.94□□□□□ -0.02
HMGA1-203ENST00000374116 PTP4A2Q12974 167 aa14.94□□□□□ -0.02
HMGA1-203ENST00000374116 AGBL2Q5U5Z8 902 aa14.94□□□□□ -0.02
HMGA1-203ENST00000374116 RBM23Q86U06 439 aaKnown RBP14.94□□□□□ -0.02
HMGA1-203ENST00000374116 CCDC105Q8IYK2 499 aa14.94□□□□□ -0.02
HMGA1-203ENST00000374116 MYLIPQ8WY64 445 aa14.94□□□□□ -0.02
HMGA1-203ENST00000374116 TLR9Q9NR96 1032 aa14.94□□□□□ -0.02
HMGA1-203ENST00000374116 SLC12A6Q9UHW9 1150 aa14.94□□□□□ -0.02
HMGA1-203ENST00000374116 SNX24Q9Y343 169 aa14.94□□□□□ -0.02
HMGA1-203ENST00000374116 COL6A3P12111 3177 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 GMNCA6NCL1 334 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 TMEM189-UBE2V1I3L0A0 370 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 CYB561D2O14569 222 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 PER2O15055 1255 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 PROSCO94903 275 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 SOD2P04179 222 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 GSTA1P08263 222 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 ASPAP45381 313 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 RAP1GAPP47736 663 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 SCTRP47872 440 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 PLTPP55058 493 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 C1QBPQ07021 282 aaKnown RBP14.93□□□□□ -0.02
HMGA1-203ENST00000374116 MYO1EQ12965 1108 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 ZNF699Q32M78 642 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 KIAA1841Q6NSI8 718 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 ZDHHC24Q6UX98 284 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 ADGRD2Q7Z7M1 963 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 RNF168Q8IYW5 571 aaPredicted RBP14.93□□□□□ -0.02
HMGA1-203ENST00000374116 ZNF606Q8WXB4 792 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 SLCO2A1Q92959 643 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 SUSD3Q96L08 255 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 ZNF560Q96MR9 790 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 ZBP1Q9H171 429 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 SPATS2LQ9NUQ6 558 aaKnown RBP14.93□□□□□ -0.02
HMGA1-203ENST00000374116 GRHL1Q9NZI5 618 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 ADAM22Q9P0K1 906 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 MTRF1LQ9UGC7 380 aaKnown RBP14.93□□□□□ -0.02
HMGA1-203ENST00000374116 SCINQ9Y6U3 715 aa14.93□□□□□ -0.02
HMGA1-203ENST00000374116 TCRBV7S2A1N4TA0A589 114 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 THAP12O43422 761 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 CXCL14O95715 111 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 RPL21P46778 160 aaKnown RBP14.92□□□□□ -0.02
HMGA1-203ENST00000374116 CCNHP51946 323 aaPredicted RBP14.92□□□□□ -0.02
HMGA1-203ENST00000374116 CDH8P55286 799 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 WSCD1Q658N2 575 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 OR2W6PQ8NHA6 318 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 GUCD1Q96NT3 240 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 TTPALQ9BTX7 342 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 CENPHQ9H3R5 247 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 CISHQ9NSE2 258 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 HAUS2Q9NVX0 235 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 ATP8A1Q9Y2Q0 1164 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.92□□□□□ -0.02
HMGA1-203ENST00000374116 E7EVH7 732 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 PSTPIP1O43586 416 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 ECEL1O95672 775 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 GBP2P32456 591 aaPredicted RBP14.92□□□□□ -0.02
HMGA1-203ENST00000374116 MAN1A1P33908 653 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 SEC24CP53992 1094 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 PMS2P54278 862 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 BIRC2Q13490 618 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 SOWAHAQ2M3V2 549 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 USP41Q3LFD5 358 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 SV2CQ496J9 727 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 PLEKHA7Q6IQ23 1121 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 RSPO2Q6UXX9 243 aaPredicted RBP14.92□□□□□ -0.02
HMGA1-203ENST00000374116 SYDE1Q6ZW31 735 aaPredicted RBP14.92□□□□□ -0.02
HMGA1-203ENST00000374116 LRRC52Q8N7C0 313 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.92□□□□□ -0.02
HMGA1-203ENST00000374116 FBXO25Q8TCJ0 367 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 CDX2Q99626 313 aaPredicted RBP14.92□□□□□ -0.02
HMGA1-203ENST00000374116 BCO2Q9BYV7 579 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 PABPC3Q9H361 631 aaKnown RBP14.92□□□□□ -0.02
HMGA1-203ENST00000374116 SMYD3Q9H7B4 428 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 VRTNQ9H8Y1 702 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 SLC24A3Q9HC58 644 aa14.92□□□□□ -0.02
HMGA1-203ENST00000374116 M0QZQ0 153 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 ADAM12O43184 909 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 ATP6V1G2O95670 118 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 NUDT17P0C025 328 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 WEE2P0C1S8 567 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 OR4Q2P0C623 313 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 FGFR3P22607 806 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 CDH5P33151 784 aaPredicted RBP14.91□□□□□ -0.02
HMGA1-203ENST00000374116 PNPLA4P41247 253 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 GLUD2P49448 558 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 MAMLD1Q13495 774 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 BYSLQ13895 437 aaKnown RBP14.91□□□□□ -0.02
HMGA1-203ENST00000374116 CCDC142Q17RM4 750 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 SGO2Q562F6 1265 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 VARS2Q5ST30 1063 aaKnown RBP14.91□□□□□ -0.02
HMGA1-203ENST00000374116 RHOT1Q8IXI2 618 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 CCT6BQ92526 530 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 TMEM209Q96SK2 561 aa14.91□□□□□ -0.02
HMGA1-203ENST00000374116 MRPL45Q9BRJ2 306 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms