RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 AGBL2Q5U5Z8 902 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 CCDC91Q7Z6B0 441 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 POMKQ9H5K3 350 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 APEX2Q9UBZ4 518 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 FAM153AQ9UHL3 310 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 DOCK8Q8NF50 2099 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 ZNF638Q14966 1978 aaKnown RBP21.5■■□□□ 1.03
SYNC-201ENST00000373484 DENND4CQ5VZ89 1909 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 ATF6P18850 670 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 PRKCIP41743 596 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 ZNF394Q53GI3 561 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 ZNF473Q8WTR7 871 aaKnown RBP21.5■■□□□ 1.03
SYNC-201ENST00000373484 IFT81Q8WYA0 676 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 CABS1Q96KC9 395 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 KREMEN1Q96MU8 473 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 NCAPGQ9BPX3 1015 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 B3GNT5Q9BYG0 378 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 DNAI2Q9GZS0 605 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 WDR6Q9NNW5 1121 aaKnown RBP21.5■■□□□ 1.03
SYNC-201ENST00000373484 SIX2Q9NPC8 291 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 PATJQ8NI35 1801 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 ACO1P21399 889 aaKnown RBP21.49■■□□□ 1.03
SYNC-201ENST00000373484 BDNFP23560 247 aa21.49■■□□□ 1.03
SYNC-201ENST00000373484 RAD23BP54727 409 aa21.49■■□□□ 1.03
SYNC-201ENST00000373484 EPHB3P54753 998 aa21.49■■□□□ 1.03
SYNC-201ENST00000373484 TJAP1Q5JTD0 557 aa21.49■■□□□ 1.03
SYNC-201ENST00000373484 DPY19L2P1Q6NXN4 242 aa21.49■■□□□ 1.03
SYNC-201ENST00000373484 VSTM1Q6UX27 236 aa21.49■■□□□ 1.03
SYNC-201ENST00000373484 GRASPQ7Z6J2 395 aaPredicted RBP21.49■■□□□ 1.03
SYNC-201ENST00000373484 NLRP14Q86W24 1093 aa21.49■■□□□ 1.03
SYNC-201ENST00000373484 ELMOD1Q8N336 334 aa21.49■■□□□ 1.03
SYNC-201ENST00000373484 C12orf29Q8N999 325 aa21.49■■□□□ 1.03
SYNC-201ENST00000373484 SLC4A11Q8NBS3 891 aa21.49■■□□□ 1.03
SYNC-201ENST00000373484 P3H4Q92791 437 aa21.49■■□□□ 1.03
SYNC-201ENST00000373484 FAM81BQ96LP2 452 aa21.49■■□□□ 1.03
SYNC-201ENST00000373484 SLITRK6Q9H5Y7 841 aa21.49■■□□□ 1.03
SYNC-201ENST00000373484 UBE2TQ9NPD8 197 aaPredicted RBP21.49■■□□□ 1.03
SYNC-201ENST00000373484 NLRC4Q9NPP4 1024 aa21.49■■□□□ 1.03
SYNC-201ENST00000373484 HCFC1R1Q9NWW0 138 aa21.49■■□□□ 1.03
SYNC-201ENST00000373484 DNMT3BQ9UBC3 853 aaKnown RBP21.49■■□□□ 1.03
SYNC-201ENST00000373484 OBSL1O75147 1896 aa21.49■■□□□ 1.03
SYNC-201ENST00000373484 A0A087X0T9 212 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 RAD51CO43502 376 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 PAEPP09466 180 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 FAM228BP0C875 321 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 MYZAPP0CAP1 466 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 PAQR9Q6ZVX9 377 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 ENOSF1Q7L5Y1 443 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 FUKQ8N0W3 1084 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 TMEM176AQ96HP8 235 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 CCT8L2Q96SF2 557 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 ZNF518BQ9C0D4 1074 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 ACTR5Q9H9F9 607 aaPredicted RBP21.48■■□□□ 1.03
SYNC-201ENST00000373484 ASB3Q9Y575 518 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 CLUHO75153 1309 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 CLDN5O00501 218 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 PTPN2P17706 415 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 RPL10AP62906 217 aaKnown RBP21.48■■□□□ 1.03
SYNC-201ENST00000373484 PPP2R5EQ16537 467 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 GJB7Q6PEY0 223 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 LRRC57Q8N9N7 239 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 SEC14L1Q92503 715 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 ZNF512Q96ME7 567 aaPredicted RBP21.48■■□□□ 1.03
SYNC-201ENST00000373484 PHF7Q9BWX1 381 aaPredicted RBP21.48■■□□□ 1.03
SYNC-201ENST00000373484 FAM49BQ9NUQ9 324 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 PLAAQ9Y263 795 aa21.48■■□□□ 1.03
SYNC-201ENST00000373484 FTCDO95954 541 aa21.47■■□□□ 1.03
SYNC-201ENST00000373484 CCDC130P13994 396 aa21.47■■□□□ 1.03
SYNC-201ENST00000373484 GPR15P49685 360 aa21.47■■□□□ 1.03
SYNC-201ENST00000373484 C6orf89Q6UWU4 347 aa21.47■■□□□ 1.03
SYNC-201ENST00000373484 SLFN11Q7Z7L1 901 aa21.47■■□□□ 1.03
SYNC-201ENST00000373484 FAM35AQ86V20 835 aa21.47■■□□□ 1.03
SYNC-201ENST00000373484 SYCE1Q8N0S2 351 aa21.47■■□□□ 1.03
SYNC-201ENST00000373484 RASGEF1CQ8N431 466 aa21.47■■□□□ 1.03
SYNC-201ENST00000373484 SH2D3CQ8N5H7 860 aa21.47■■□□□ 1.03
SYNC-201ENST00000373484 PSMG2Q969U7 264 aa21.47■■□□□ 1.03
SYNC-201ENST00000373484 AVENQ9NQS1 362 aaPredicted RBP21.47■■□□□ 1.03
SYNC-201ENST00000373484 TTC7AQ9ULT0 858 aaPredicted RBP21.47■■□□□ 1.03
SYNC-201ENST00000373484 NENFQ9UMX5 172 aa21.47■■□□□ 1.03
SYNC-201ENST00000373484 PCDHB4Q9Y5E5 795 aa21.47■■□□□ 1.03
SYNC-201ENST00000373484 VCANP13611 3396 aa21.46■■□□□ 1.03
SYNC-201ENST00000373484 PGRMC1O00264 195 aaKnown RBP21.46■■□□□ 1.03
SYNC-201ENST00000373484 RHOP08100 348 aa21.46■■□□□ 1.03
SYNC-201ENST00000373484 MFAP3P55082 362 aa21.46■■□□□ 1.03
SYNC-201ENST00000373484 NTHL1P78549 312 aa21.46■■□□□ 1.03
SYNC-201ENST00000373484 RAPGEF1Q13905 1077 aa21.46■■□□□ 1.03
SYNC-201ENST00000373484 VEPH1Q14D04 833 aa21.46■■□□□ 1.03
SYNC-201ENST00000373484 DDR2Q16832 855 aa21.46■■□□□ 1.03
SYNC-201ENST00000373484 PABPC1LQ4VXU2 614 aaKnown RBP21.46■■□□□ 1.03
SYNC-201ENST00000373484 TMEM270Q6UE05 265 aa21.46■■□□□ 1.03
SYNC-201ENST00000373484 ITIH5Q86UX2 942 aa21.46■■□□□ 1.03
SYNC-201ENST00000373484 SLC2A14Q8TDB8 520 aa21.46■■□□□ 1.03
SYNC-201ENST00000373484 CYFIP2Q96F07 1278 aa21.46■■□□□ 1.03
SYNC-201ENST00000373484 HEXIM2Q96MH2 286 aaKnown RBP21.46■■□□□ 1.03
SYNC-201ENST00000373484 HNRNPABQ99729 332 aaKnown RBP21.46■■□□□ 1.03
SYNC-201ENST00000373484 CORO1BQ9BR76 489 aa21.46■■□□□ 1.03
SYNC-201ENST00000373484 MED10Q9BTT4 135 aa21.46■■□□□ 1.03
SYNC-201ENST00000373484 TMEM30AQ9NV96 361 aa21.46■■□□□ 1.03
SYNC-201ENST00000373484 PRKAG3Q9UGI9 489 aa21.46■■□□□ 1.03
SYNC-201ENST00000373484 CNTN6Q9UQ52 1028 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms