RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 CUL3Q13618 768 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 FBXO47Q5MNV8 452 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 TTC39BQ5VTQ0 682 aaPredicted RBP18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 POLNQ7Z5Q5 900 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 SRPK1Q96SB4 655 aaKnown RBP18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 HAPLN2Q9GZV7 340 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 NXF3Q9H4D5 531 aaKnown RBP18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 CXorf56Q9H5V9 222 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 SLC39A10Q9ULF5 831 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 GOLGA8QA0A0J9YX86 632 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 GOLGA8OA6NCC3 632 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 GOLGA8NF8WBI6 632 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 GAS2O43903 313 aaKnown RBP18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 TCN1P20061 433 aaPredicted RBP18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 CASP2P42575 452 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 FASTKD1Q53R41 847 aaKnown RBP18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 ZNF484Q5JVG2 852 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 RASIP1Q5U651 963 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 BZW1Q7L1Q6 419 aaKnown RBP18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 TFB1MQ8WVM0 346 aaKnown RBP18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 TUBGCP4Q9UGJ1 667 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 FAM237BA0A1B0GVD1 139 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 AP1G2O75843 785 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 RTP1P59025 263 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 RPS6KA2Q15349 733 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 HABP4Q5JVS0 413 aaKnown RBP18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 C4orf50Q6ZRC1 276 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 ATXN2LQ8WWM7 1075 aaKnown RBP18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 CCT6BQ92526 530 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 SPON1Q9HCB6 807 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 C20orf96Q9NUD7 363 aaPredicted RBP18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 PACSIN3Q9UKS6 424 aa18.32■□□□□ 0.52
TRAF3IP1-201ENST00000373327 XIRP1Q702N8 1843 aaKnown RBP18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 CYB561D2O14569 222 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 BNIP3LO60238 219 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 SMIM24O75264 130 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 FOXN2P32314 431 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 TAF6P49848 677 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 POLE2P56282 527 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 VSTM1Q6UX27 236 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 COLGALT1Q8NBJ5 622 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 PDCD6IPQ8WUM4 868 aaKnown RBP18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 CITO14578 2027 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 MEI4A8MW99 385 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 TNPO2O14787 897 aaKnown RBP18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 ATP5HO75947 161 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 TRUB2O95900 331 aaKnown RBP18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 MGAT1P26572 445 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 POU5F1Q01860 360 aaKnown RBP18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 GBE1Q04446 702 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 RCN1Q15293 331 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 ACCSLQ4AC99 568 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 SLC26A11Q86WA9 606 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 CPT1BQ92523 772 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 FBXL18Q96ME1 805 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 GBP5Q96PP8 586 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 R3HDMLQ9H3Y0 253 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 SNCAIPQ9Y6H5 919 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 MSCO60682 206 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 ENTPD5O75356 428 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 TAC1P20366 129 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 SERPINB4P48594 390 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 MPP2Q14168 576 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 ADGRF2Q8IZF7 708 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 HDAC11Q96DB2 347 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 VCXQ9H320 206 aa18.31■□□□□ 0.52
TRAF3IP1-201ENST00000373327 MAP3K7O43318 606 aa18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 TRPA1O75762 1119 aa18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 UPP2O95045 317 aa18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 MT-CO1P00395 513 aa18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 MTFR1Q15390 333 aa18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 FBXO41Q8TF61 875 aa18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 PABPC5Q96DU9 382 aaKnown RBP18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 MROH8Q9H579 483 aa18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 CPSF3Q9UKF6 684 aaKnown RBP18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 PRG3Q9Y2Y8 225 aaPredicted RBP18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 CELF2O95319 508 aaKnown RBP18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 SPOUT1Q5T280 376 aaKnown RBP18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 MTMR14Q8NCE2 650 aa18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 CLEC4CQ8WTT0 213 aa18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 TCRBV9S1A1TA0A576 114 aa18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 JCHAINP01591 159 aa18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 RAB6CQ53S08 254 aa18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 PMF1Q6P1K2 205 aa18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 BBS12Q6ZW61 710 aa18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 RAB6CQ9H0N0 254 aa18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 KRT82Q9NSB4 513 aa18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 SLC24A2Q9UI40 661 aa18.3■□□□□ 0.52
TRAF3IP1-201ENST00000373327 CCDC22O60826 627 aa18.29■□□□□ 0.52
TRAF3IP1-201ENST00000373327 POMCP01189 267 aa18.29■□□□□ 0.52
TRAF3IP1-201ENST00000373327 MCF2P10911 925 aa18.29■□□□□ 0.52
TRAF3IP1-201ENST00000373327 GOT1P17174 413 aa18.29■□□□□ 0.52
TRAF3IP1-201ENST00000373327 NCALDP61601 193 aa18.29■□□□□ 0.52
TRAF3IP1-201ENST00000373327 RPAINQ86UA6 219 aa18.29■□□□□ 0.52
TRAF3IP1-201ENST00000373327 ECHDC2Q86YB7 292 aa18.29■□□□□ 0.52
TRAF3IP1-201ENST00000373327 MYLK4Q86YV6 388 aaPredicted RBP18.29■□□□□ 0.52
TRAF3IP1-201ENST00000373327 CENPTQ96BT3 561 aa18.29■□□□□ 0.52
TRAF3IP1-201ENST00000373327 ALKBH8Q96BT7 664 aaKnown RBP18.29■□□□□ 0.52
TRAF3IP1-201ENST00000373327 WWP1Q9H0M0 922 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms