RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 IFRD2Q12894 506 aaPredicted RBP6.67□□□□□ -1.34
CHD6-202ENST00000373222 XRCC4Q13426 336 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 TRPC3Q13507 836 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 R3HDM1Q15032 1099 aaKnown RBP6.67□□□□□ -1.34
CHD6-202ENST00000373222 MLC1Q15049 377 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 SMAD1Q15797 465 aaKnown RBP6.67□□□□□ -1.34
CHD6-202ENST00000373222 MAPK6Q16659 721 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 DUOXA2Q1HG44 320 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 TFDP3Q5H9I0 405 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 RNASEH2BQ5TBB1 312 aaKnown RBP6.67□□□□□ -1.34
CHD6-202ENST00000373222 FAXCQ5TGI0 409 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 ATF7IP2Q5U623 682 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 MAP1SQ66K74 1059 aaPredicted RBP6.67□□□□□ -1.34
CHD6-202ENST00000373222 ZC3H18Q86VM9 953 aaKnown RBP6.67□□□□□ -1.34
CHD6-202ENST00000373222 ECHDC2Q86YB7 292 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 WDR49Q8IV35 697 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 FAM71DQ8N9W8 422 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 CCDC63Q8NA47 563 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 C3orf20Q8ND61 904 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 DNERQ8NFT8 737 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 SEPT1Q8WYJ6 367 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 TMEM237Q96Q45 408 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 MRPL4Q9BYD3 311 aaKnown RBP6.67□□□□□ -1.34
CHD6-202ENST00000373222 ELOVL4Q9GZR5 314 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 CDT1Q9H211 546 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 HOMER3Q9NSC5 361 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 GPATCH2LQ9NWQ4 482 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 BAIAP2L1Q9UHR4 511 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 USP15Q9Y4E8 981 aaPredicted RBP6.67□□□□□ -1.34
CHD6-202ENST00000373222 LACTBL1A8MY62 500 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 F5H423 210 aaPredicted RBP6.67□□□□□ -1.34
CHD6-202ENST00000373222 IGF2BP3O00425 579 aaKnown RBP eCLIP6.67□□□□□ -1.34
CHD6-202ENST00000373222 NOP56O00567 594 aaKnown RBP6.67□□□□□ -1.34
CHD6-202ENST00000373222 PPEF2O14830 753 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 CDH16O75309 829 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 KRT16P08779 473 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 ZNF286BP0CG31 522 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 KRT3P12035 628 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 TFE3P19532 575 aaPredicted RBP6.67□□□□□ -1.34
CHD6-202ENST00000373222 SERPINB3P29508 390 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 CASP2P42575 452 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 SOX9P48436 509 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 CTCFP49711 727 aaPredicted RBP6.67□□□□□ -1.34
CHD6-202ENST00000373222 RGS7P49802 495 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 VCPP55072 806 aaKnown RBP6.67□□□□□ -1.34
CHD6-202ENST00000373222 PSMC1P62191 440 aaKnown RBP6.67□□□□□ -1.34
CHD6-202ENST00000373222 JADE1Q6IE81 842 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 EFCAB12Q6NXP0 572 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 C16orf46Q6P387 395 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 METTL7BQ6UX53 244 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 SPATA21Q7Z572 469 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 TRABD2AQ86V40 505 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 RCOR2Q8IZ40 523 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 GJD3Q8N144 294 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 CRIPAKQ8N1N5 446 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 AGGF1Q8N302 714 aaeCLIP6.67□□□□□ -1.344e-12■■■□□ 16.8
CHD6-202ENST00000373222 ANKS4BQ8N8V4 417 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 SLC4A11Q8NBS3 891 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 TMEM35BQ8NCS4 154 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 CPT1BQ92523 772 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 TIFAQ96CG3 184 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 EAF1Q96JC9 268 aaPredicted RBP6.67□□□□□ -1.34
CHD6-202ENST00000373222 VCPIP1Q96JH7 1222 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 SPATA33Q96N06 139 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 LBHD1Q9BQE6 289 aaPredicted RBP6.67□□□□□ -1.34
CHD6-202ENST00000373222 CALN1Q9BXU9 219 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 ECT2Q9H8V3 914 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 NRBP2Q9NSY0 501 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 MAP10Q9P2G4 905 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 EVLQ9UI08 416 aaPredicted RBP6.67□□□□□ -1.34
CHD6-202ENST00000373222 AGTPBP1Q9UPW5 1226 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 STK38LQ9Y2H1 464 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 PTCH2Q9Y6C5 1203 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 NUP205Q92621 2012 aa6.67□□□□□ -1.34
CHD6-202ENST00000373222 SBF1O95248 1867 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 A0A087WZ62 844 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 H0YCG3 227 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 FAM155BO75949 473 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 TJP3O95049 919 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 KRT15P19012 456 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 RPL22P35268 128 aaKnown RBP6.66□□□□□ -1.34
CHD6-202ENST00000373222 MBTD1Q05BQ5 628 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 TMEM62Q0P6H9 643 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 OVGP1Q12889 678 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 CCDC142Q17RM4 750 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 SGSM1Q2NKQ1 1148 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 CDCA2Q69YH5 1023 aaPredicted RBP6.66□□□□□ -1.34
CHD6-202ENST00000373222 TRIM72Q6ZMU5 477 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 XYLT1Q86Y38 959 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 APOBEC3FQ8IUX4 373 aaKnown RBP6.66□□□□□ -1.34
CHD6-202ENST00000373222 CHST13Q8NET6 341 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 SLC35B2Q8TB61 432 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 SMAD5Q99717 465 aaKnown RBP6.66□□□□□ -1.34
CHD6-202ENST00000373222 FDXACB1Q9BRP7 624 aaPredicted RBP6.66□□□□□ -1.34
CHD6-202ENST00000373222 TRABDQ9H4I3 376 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 ACTR5Q9H9F9 607 aaPredicted RBP6.66□□□□□ -1.34
CHD6-202ENST00000373222 LGALS13Q9UHV8 139 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 GINS2Q9Y248 185 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 C2orf71A6NGG8 1288 aa6.66□□□□□ -1.34
CHD6-202ENST00000373222 M0QYV0 167 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms