RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 GPRC5DQ9NZD1 345 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 AHSPQ9NZD4 102 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 ZBTB12Q9Y330 459 aaPredicted RBP11.88□□□□□ -0.51
VCL-202ENST00000372755 B3GAT3O94766 335 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 BMP10O95393 424 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 URODP06132 367 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 RENBPP51606 427 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 RAD23AP54725 363 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 ANTXR2P58335 489 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 BFSP2Q13515 415 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 CTXN3Q4LDR2 81 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 MIER2Q8N344 545 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 AGBL3Q8NEM8 1001 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 GINS4Q9BRT9 223 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 PLA2R1Q13018 1463 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 NCAM2O15394 837 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 NDUFB5O43674 189 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 MPOP05164 745 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 YWHAQP27348 245 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 SARSP49591 514 aaKnown RBP11.88□□□□□ -0.51
VCL-202ENST00000372755 CCT8P50990 548 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 EPHB3P54753 998 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 MAD2L1Q13257 205 aaPredicted RBP11.88□□□□□ -0.51
VCL-202ENST00000372755 SLC44A4Q53GD3 710 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 B3GALNT2Q8NCR0 500 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 EPS8L3Q8TE67 593 aaKnown RBP11.88□□□□□ -0.51
VCL-202ENST00000372755 CENPTQ96BT3 561 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 FAM120BQ96EK7 910 aaKnown RBP11.88□□□□□ -0.51
VCL-202ENST00000372755 EPB41L4AQ9HCS5 686 aaPredicted RBP11.88□□□□□ -0.51
VCL-202ENST00000372755 AP4E1Q9UPM8 1137 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 DNAJC16Q9Y2G8 782 aa11.88□□□□□ -0.51
VCL-202ENST00000372755 GPR75-ASB3A0A0A6YYF3 556 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 MAGEB16A2A368 324 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 CAMTA2O94983 1202 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 TPBGLP0DKB5 382 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 GTF2E2P29084 291 aaKnown RBP11.87□□□□□ -0.51
VCL-202ENST00000372755 HALP42357 657 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 YWHAZP63104 245 aaKnown RBP11.87□□□□□ -0.51
VCL-202ENST00000372755 OTUD4Q01804 1114 aaKnown RBP11.87□□□□□ -0.51
VCL-202ENST00000372755 FBXO33Q7Z6M2 555 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 BHMTQ93088 406 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 MTMR12Q9C0I1 747 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 GPAMQ9HCL2 828 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 COMMD8Q9NX08 183 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 SLC24A2Q9UI40 661 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 DCDC2CA8MYV0 355 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 FAM220BPB1ANY3 271 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 TM9SF1O15321 606 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 CKMP06732 381 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 CLTBP09497 229 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 RARGP13631 454 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 MLH1P40692 756 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 RXRGP48443 463 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 GLRA4Q5JXX5 417 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 TMC2Q8TDI7 906 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 PAFAH2Q99487 392 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 KCTD14Q9BQ13 255 aaPredicted RBP11.87□□□□□ -0.51
VCL-202ENST00000372755 OSBPL6Q9BZF3 934 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 DEFB129Q9H1M3 183 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 CYP3A43Q9HB55 503 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 DPP7Q9UHL4 492 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 PDIA6Q15084 440 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 PLCL1Q15111 1095 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 GSTA3Q16772 222 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 TAF2Q6P1X5 1199 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 SPOCD1Q6ZMY3 1216 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 VN1R5Q7Z5H4 357 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 TDRD5Q8NAT2 981 aaKnown RBP11.87□□□□□ -0.51
VCL-202ENST00000372755 C19orf18Q8NEA5 215 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 VMP1Q96GC9 406 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 OLFM1Q99784 485 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 CCDC3Q9BQI4 270 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 KLHL4Q9C0H6 718 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 CHORDC1Q9UHD1 332 aaPredicted RBP11.87□□□□□ -0.51
VCL-202ENST00000372755 FAM153AQ9UHL3 310 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 TMEM114B3SHH9 223 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 IFRD1O00458 451 aaPredicted RBP11.87□□□□□ -0.51
VCL-202ENST00000372755 SYNCRIPO60506 623 aaKnown RBP11.87□□□□□ -0.51
VCL-202ENST00000372755 SUPT20HL2P0C7V6 817 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 GZMAP12544 262 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 CYP11B1P15538 503 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 AMPD2Q01433 879 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 NOA1Q8NC60 698 aaKnown RBP11.87□□□□□ -0.51
VCL-202ENST00000372755 HIC2Q96JB3 615 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 SMAD5Q99717 465 aaKnown RBP11.87□□□□□ -0.51
VCL-202ENST00000372755 TMEM39BQ9GZU3 492 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 MIEF1Q9NQG6 463 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 KLHL3Q9UH77 587 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 GLRBP48167 497 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 CCNG1P51959 295 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 PRMT9Q6P2P2 845 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 WDR49Q8IV35 697 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 SPIRE2Q8WWL2 714 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 PARVBQ9HBI1 364 aa11.87□□□□□ -0.51
VCL-202ENST00000372755 AVENQ9NQS1 362 aaPredicted RBP11.87□□□□□ -0.51
VCL-202ENST00000372755 SLC12A8A0AV02 714 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 FOXN3O00409 490 aaPredicted RBP11.86□□□□□ -0.51
VCL-202ENST00000372755 TRIM13O60858 407 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 PDE5AO76074 875 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 CPA3P15088 417 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms