RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 CDK5RAP1Q96SZ6 601 aaKnown RBP21.04■□□□□ 0.96
TMEM53-205ENST00000372244 PHOX2BQ99453 314 aa21.04■□□□□ 0.96
TMEM53-205ENST00000372244 ULBP1Q9BZM6 244 aa21.04■□□□□ 0.96
TMEM53-205ENST00000372244 LRRC4Q9HBW1 653 aa21.04■□□□□ 0.96
TMEM53-205ENST00000372244 FANCLQ9NW38 375 aa21.04■□□□□ 0.96
TMEM53-205ENST00000372244 NUDT5Q9UKK9 219 aa21.04■□□□□ 0.96
TMEM53-205ENST00000372244 KRT5P13647 590 aa21.03■□□□□ 0.96
TMEM53-205ENST00000372244 GPD2P43304 727 aa21.03■□□□□ 0.96
TMEM53-205ENST00000372244 RPL34P49207 117 aaKnown RBP21.03■□□□□ 0.96
TMEM53-205ENST00000372244 LRRC32Q14392 662 aa21.03■□□□□ 0.96
TMEM53-205ENST00000372244 DHCR24Q15392 516 aa21.03■□□□□ 0.96
TMEM53-205ENST00000372244 MEA1Q16626 185 aa21.03■□□□□ 0.96
TMEM53-205ENST00000372244 C10orf120Q5SQS8 335 aa21.03■□□□□ 0.96
TMEM53-205ENST00000372244 FSTL4Q6MZW2 842 aa21.03■□□□□ 0.96
TMEM53-205ENST00000372244 TADA2BQ86TJ2 420 aa21.03■□□□□ 0.96
TMEM53-205ENST00000372244 ZNF606Q8WXB4 792 aa21.03■□□□□ 0.96
TMEM53-205ENST00000372244 NDRG1Q92597 394 aaKnown RBP21.03■□□□□ 0.96
TMEM53-205ENST00000372244 SECISBP2LQ93073 1101 aaKnown RBP21.03■□□□□ 0.96
TMEM53-205ENST00000372244 HSFY1Q96LI6 401 aa21.03■□□□□ 0.96
TMEM53-205ENST00000372244 RBM12Q9NTZ6 932 aaKnown RBP21.03■□□□□ 0.96
TMEM53-205ENST00000372244 FBXO4Q9UKT5 387 aa21.03■□□□□ 0.96
TMEM53-205ENST00000372244 HELZP42694 1942 aaKnown RBP21.03■□□□□ 0.96
TMEM53-205ENST00000372244 ZFHX2Q9C0A1 2572 aaPredicted RBP21.03■□□□□ 0.96
TMEM53-205ENST00000372244 LRRC10BA6NIK2 292 aa21.02■□□□□ 0.96
TMEM53-205ENST00000372244 SCAMP3O14828 347 aaKnown RBP21.02■□□□□ 0.96
TMEM53-205ENST00000372244 LAMTOR5O43504 91 aa21.02■□□□□ 0.96
TMEM53-205ENST00000372244 CYP17A1P05093 508 aa21.02■□□□□ 0.96
TMEM53-205ENST00000372244 SP9P0CG40 484 aa21.02■□□□□ 0.96
TMEM53-205ENST00000372244 NBL1P41271 181 aa21.02■□□□□ 0.96
TMEM53-205ENST00000372244 YWHAGP61981 247 aaKnown RBP eCLIP21.02■□□□□ 0.96
TMEM53-205ENST00000372244 ADIGQ0VDE8 80 aa21.02■□□□□ 0.96
TMEM53-205ENST00000372244 GRSF1Q12849 480 aaKnown RBP eCLIP21.02■□□□□ 0.96
TMEM53-205ENST00000372244 ARHGAP44Q17R89 818 aa21.02■□□□□ 0.96
TMEM53-205ENST00000372244 ZNF528Q3MIS6 628 aa21.02■□□□□ 0.96
TMEM53-205ENST00000372244 NAIF1Q69YI7 327 aaPredicted RBP21.02■□□□□ 0.96
TMEM53-205ENST00000372244 P2RY13Q9BPV8 354 aa21.02■□□□□ 0.96
TMEM53-205ENST00000372244 ACP6Q9NPH0 428 aa21.02■□□□□ 0.96
TMEM53-205ENST00000372244 CNGB3Q9NQW8 809 aa21.02■□□□□ 0.96
TMEM53-205ENST00000372244 FAM86C1Q9NVL1 165 aa21.02■□□□□ 0.96
TMEM53-205ENST00000372244 DNAJC12Q9UKB3 198 aa21.02■□□□□ 0.96
TMEM53-205ENST00000372244 SH3BP1Q9Y3L3 701 aa21.02■□□□□ 0.96
TMEM53-205ENST00000372244 VPS13AQ96RL7 3174 aa21.02■□□□□ 0.96
TMEM53-205ENST00000372244 PROB1E7EW31 1015 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 M0QYV0 167 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 FOXN3O00409 490 aaPredicted RBP21.01■□□□□ 0.95
TMEM53-205ENST00000372244 MDM4O15151 490 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 KRT31Q15323 416 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 BBS7Q8IWZ6 715 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 SPEM1Q8N4L4 309 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 STK32AQ8WU08 396 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 PRMT8Q9NR22 394 aaPredicted RBP21.01■□□□□ 0.95
TMEM53-205ENST00000372244 AJAP1Q9UKB5 411 aaPredicted RBP21.01■□□□□ 0.95
TMEM53-205ENST00000372244 YJEFN3A6XGL0 299 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 E7ENQ6 273 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 LETM1O95202 739 aaPredicted RBP21.01■□□□□ 0.95
TMEM53-205ENST00000372244 DRD1P21728 446 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 OPRD1P41143 372 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 MYL5Q02045 173 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 TYRO3Q06418 890 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 NCAPHQ15003 741 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 KLHDC7AQ5VTJ3 777 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 BSPRYQ5W0U4 402 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 NELL1Q92832 810 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 EXOC4Q96A65 974 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 HSD3B7Q9H2F3 369 aa21.01■□□□□ 0.95
TMEM53-205ENST00000372244 RIF1Q5UIP0 2472 aaKnown RBP21■□□□□ 0.95
TMEM53-205ENST00000372244 MED7O43513 233 aa21■□□□□ 0.95
TMEM53-205ENST00000372244 GNA15P30679 374 aa21■□□□□ 0.95
TMEM53-205ENST00000372244 RGS7P49802 495 aa21■□□□□ 0.95
TMEM53-205ENST00000372244 DAOAP59103 153 aa21■□□□□ 0.95
TMEM53-205ENST00000372244 COG7P83436 770 aa21■□□□□ 0.95
TMEM53-205ENST00000372244 GOLGA8FQ08AF8 430 aa21■□□□□ 0.95
TMEM53-205ENST00000372244 GOLGA8DPQ0D2H9 430 aa21■□□□□ 0.95
TMEM53-205ENST00000372244 DENND1BQ6P3S1 775 aa21■□□□□ 0.95
TMEM53-205ENST00000372244 Q6ZS52 159 aa21■□□□□ 0.95
TMEM53-205ENST00000372244 FAM71AQ8IYT1 594 aa21■□□□□ 0.95
TMEM53-205ENST00000372244 SIX6OS1Q8N1H7 587 aa21■□□□□ 0.95
TMEM53-205ENST00000372244 CD101Q93033 1021 aa21■□□□□ 0.95
TMEM53-205ENST00000372244 NAA15Q9BXJ9 866 aaKnown RBP21■□□□□ 0.95
TMEM53-205ENST00000372244 TAB2Q9NYJ8 693 aa21■□□□□ 0.95
TMEM53-205ENST00000372244 STC2O76061 302 aa20.99■□□□□ 0.95
TMEM53-205ENST00000372244 ADH1CP00326 375 aa20.99■□□□□ 0.95
TMEM53-205ENST00000372244 EGFP01133 1207 aa20.99■□□□□ 0.95
TMEM53-205ENST00000372244 TDGF1P13385 188 aa20.99■□□□□ 0.95
TMEM53-205ENST00000372244 LCP1P13796 627 aa20.99■□□□□ 0.95
TMEM53-205ENST00000372244 ZNF18P17022 549 aa20.99■□□□□ 0.95
TMEM53-205ENST00000372244 CLCN1P35523 988 aa20.99■□□□□ 0.95
TMEM53-205ENST00000372244 USP8P40818 1118 aa20.99■□□□□ 0.95
TMEM53-205ENST00000372244 CSTF1Q05048 431 aaKnown RBP20.99■□□□□ 0.95
TMEM53-205ENST00000372244 LY6G5CQ5SRR4 150 aa20.99■□□□□ 0.95
TMEM53-205ENST00000372244 CAVIN1Q6NZI2 390 aaKnown RBP20.99■□□□□ 0.95
TMEM53-205ENST00000372244 Q6ZNB5 142 aa20.99■□□□□ 0.95
TMEM53-205ENST00000372244 MIB1Q86YT6 1006 aa20.99■□□□□ 0.95
TMEM53-205ENST00000372244 IRGQQ8WZA9 623 aa20.99■□□□□ 0.95
TMEM53-205ENST00000372244 EZH1Q92800 747 aaPredicted RBP20.99■□□□□ 0.95
TMEM53-205ENST00000372244 SLC4A5Q9BY07 1137 aa20.99■□□□□ 0.95
TMEM53-205ENST00000372244 VPS16Q9H269 839 aa20.99■□□□□ 0.95
TMEM53-205ENST00000372244 SPHK2Q9NRA0 654 aa20.99■□□□□ 0.95
TMEM53-205ENST00000372244 USP34Q70CQ2 3546 aa20.98■□□□□ 0.95
TMEM53-205ENST00000372244 A0A0A0MRY4 1105 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms