RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 SZRD1Q7Z422 152 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 IRF2BP2Q7Z5L9 587 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 C12orf56Q8IXR9 622 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 COLGALT1Q8NBJ5 622 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 RNF217Q8TC41 542 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 TRPC7Q9HCX4 862 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 BLOC1S6Q9UL45 172 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 SUFUQ9UMX1 484 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 NFASCO94856 1347 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 EIF4E1BA6NMX2 242 aaKnown RBP12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 CHRM3P20309 590 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 PTPN4P29074 926 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 ALDH1A3P47895 512 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 ILF2Q12905 390 aaKnown RBP12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 SPDYAQ5MJ70 313 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 TAF2Q6P1X5 1199 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 SGF29Q96ES7 293 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 INPP4AQ96PE3 977 aaPredicted RBP12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 CHST7Q9NS84 486 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 TISP43B9A030 160 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 CLASP2O75122 1294 aaKnown RBP12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 RBP1P09455 135 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 DNAJB2P25686 324 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 MIPP30301 263 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 AKT1P31749 480 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 EPHX2P34913 555 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 GP5P40197 560 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 ZNF135P52742 658 aaPredicted RBP12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 DLG4P78352 724 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 STRA8Q7Z7C7 330 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 OR9Q1Q8NGQ5 310 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 LNX1Q8TBB1 728 aaPredicted RBP12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 GFM2Q969S9 779 aaKnown RBP12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 OPTNQ96CV9 577 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 SNTG2Q9NY99 539 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 NCKIPSDQ9NZQ3 722 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 A0A0U1RQJ8 604 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 C2orf81A6NN90 581 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 SUPT7LO94864 414 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 ITGB5P18084 799 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 AQP5P55064 265 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 ST8SIA6P61647 398 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 IFI35P80217 286 aaPredicted RBP12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 ARHGEF7Q14155 803 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 TTLL9Q3SXZ7 439 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 AARS2Q5JTZ9 985 aaKnown RBP12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 TMEM139Q8IV31 216 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 RAB42Q8N4Z0 105 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 CENPTQ96BT3 561 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 NAF1Q96HR8 494 aaKnown RBP12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 HES6Q96HZ4 224 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 LBHD1Q9BQE6 289 aaPredicted RBP12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 CINPQ9BW66 212 aaPredicted RBP12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 SETD4Q9NVD3 440 aa12.23□□□□□ -0.45
DEPDC1-201ENST00000370966 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 CSDE1O75534 798 aaKnown RBP12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 MICAL2O94851 1124 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 ETFBP38117 255 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 HSPA13P48723 471 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 RPL10AP62906 217 aaKnown RBP12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 ZNF177Q13360 481 aaPredicted RBP12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 ZACNQ401N2 412 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 SEL1L3Q68CR1 1132 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 MTDHQ86UE4 582 aaKnown RBP12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 RIOX2Q8IUF8 465 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 NUP93Q8N1F7 819 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 SYT15Q9BQS2 421 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 ASCC2Q9H1I8 757 aaPredicted RBP12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 CHCHD3Q9NX63 227 aaKnown RBP12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 CYP39A1Q9NYL5 469 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 SOX13Q9UN79 622 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 DNAJC16Q9Y2G8 782 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 SH3BP1Q9Y3L3 701 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 NID2Q14112 1375 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 MYPNQ86TC9 1320 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 LACTBL1A8MY62 500 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 TGFB1I1O43294 461 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 ADRB2P07550 413 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 UBA1P22314 1058 aaKnown RBP12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 NUDT2P50583 147 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 RASA2Q15283 850 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 RCN1Q15293 331 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 TMEM154Q6P9G4 183 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 HTR3CQ8WXA8 447 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 LRRC19Q9H756 370 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 MYO5BQ9ULV0 1848 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 SIGLEC16A6NMB1 481 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 HACD1B0YJ81 288 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 F5H5T6 163 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 SSTR1P30872 391 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 PTPN7P35236 360 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 MAP3K7CLP57077 242 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 POU4F1Q01851 419 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 SLC6A3Q01959 620 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 CNGA2Q16280 664 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 SCUBE1Q8IWY4 988 aa12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 PCSK9Q8NBP7 692 aaKnown RBP12.22□□□□□ -0.45
DEPDC1-201ENST00000370966 FBXO32Q969P5 355 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms