RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 LRRC38Q5VT99 294 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 TATDN1Q6P1N9 297 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 ATG14Q6ZNE5 492 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 TRIM67Q6ZTA4 783 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 FRMD7Q6ZUT3 714 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 ANO5Q75V66 913 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 FAF2Q96CS3 445 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 SENP6Q9GZR1 1112 aaPredicted RBP10.02□□□□□ -0.81
LRRC40-201ENST00000370952 EHMT1Q9H9B1 1298 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 PNPOQ9NVS9 261 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 COL20A1Q9P218 1284 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 SLC9A2Q9UBY0 812 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 APOBEC2Q9Y235 224 aaKnown RBP10.02□□□□□ -0.81
LRRC40-201ENST00000370952 ZNF536O15090 1300 aa10.02□□□□□ -0.81
LRRC40-201ENST00000370952 MYO18AQ92614 2054 aaKnown RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 SUPT3HO75486 399 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 CRTAMO95727 393 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 C4BPAP04003 597 aaKnown RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 CD1EP15812 388 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 RFC1P35251 1148 aaPredicted RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 XIAPP98170 497 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 SEZ6Q53EL9 994 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 FASTKD1Q53R41 847 aaKnown RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 PPP6R3Q5H9R7 873 aaPredicted RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 ANGEL2Q5VTE6 544 aaKnown RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 TSHZ1Q6ZSZ6 1077 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 BBS12Q6ZW61 710 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 WDR75Q8IWA0 830 aaKnown RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 PHTF2Q8N3S3 785 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 MARVELD2Q8N4S9 558 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 ARFGAP1Q8N6T3 406 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 EMC1Q8N766 993 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 JOSD2Q8TAC2 188 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 HSPH1Q92598 858 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 BTBD9Q96Q07 612 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 CALN1Q9BXU9 219 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 DDX56Q9NY93 547 aaKnown RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 ZC3H7BQ9UGR2 993 aaKnown RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 CIDEBQ9UHD4 219 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 CCNL1Q9UK58 526 aaPredicted RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 AP4B1Q9Y6B7 739 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 CROCCQ5TZA2 2017 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 AP1G1O43747 822 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 ITGBL1O95965 494 aaPredicted RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 KDELR1P24390 212 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 YWHAZP63104 245 aaKnown RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 ZBTB41Q5SVQ8 909 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 FAM182BQ5T319 152 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 C6orf52Q5T4I8 152 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 OGFRL1Q5TC84 451 aaPredicted RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 TRMT10BQ6PF06 316 aaKnown RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 DARS2Q6PI48 645 aaKnown RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 MAVSQ7Z434 540 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 KIAA0319LQ8IZA0 1049 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 RTKN2Q8IZC4 609 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 ADGRF2Q8IZF7 708 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 GALNT4Q8N4A0 578 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 PIWIL2Q8TC59 973 aaKnown RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 SPATA18Q8TC71 538 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 ACTRT2Q8TDY3 377 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 TFB1MQ8WVM0 346 aaKnown RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 JADE3Q92613 823 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 ZC3H12CQ9C0D7 883 aaKnown RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 RAB6BQ9NRW1 208 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 HOMER2Q9NSB8 354 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 ARHGEF38Q9NXL2 777 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 ZNF711Q9Y462 761 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 COL16A1Q07092 1604 aaPredicted RBP10.01□□□□□ -0.81
LRRC40-201ENST00000370952 ZNF541Q9H0D2 1346 aa10.01□□□□□ -0.81
LRRC40-201ENST00000370952 TCRBV5S1A1TA0A578 114 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 H0YIN7 160 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 CASQ2O14958 399 aaPredicted RBP10□□□□□ -0.81
LRRC40-201ENST00000370952 MCF2LO15068 1137 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 LRCH4O75427 683 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 SRGAP2CP0DJJ0 459 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 SRGAP2BP0DMP2 458 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 PTPN7P35236 360 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 GMPRP36959 345 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 PLOD1Q02809 727 aaPredicted RBP10□□□□□ -0.81
LRRC40-201ENST00000370952 MMRN1Q13201 1228 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 DCTN2Q13561 401 aaKnown RBP10□□□□□ -0.81
LRRC40-201ENST00000370952 AMIGO2Q86SJ2 522 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 KBTBD6Q86V97 674 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 PQLC1Q8N2U9 271 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 CCDC33Q8N5R6 958 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 CSRNP1Q96S65 589 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 PLAC1Q9HBJ0 212 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 THAP1Q9NVV9 213 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 SLC17A6Q9P2U8 582 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 E2F8A0AVK6 867 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 HMX2A2RU54 273 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 SPDYE2BA6NHP3 402 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 BOLA2-SMG1P6H3BVE0 249 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 RGL2O15211 777 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 SPDYE6P0CI01 402 aa10□□□□□ -0.81
LRRC40-201ENST00000370952 NELFEP18615 380 aaKnown RBP10□□□□□ -0.81
LRRC40-201ENST00000370952 SLC25A11Q02978 314 aaKnown RBP10□□□□□ -0.81
LRRC40-201ENST00000370952 PPIDQ08752 370 aaKnown RBP10□□□□□ -0.81
LRRC40-201ENST00000370952 PIGHQ14442 188 aaPredicted RBP10□□□□□ -0.81
LRRC40-201ENST00000370952 PDK1Q15118 436 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms