RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 MTERF3Q96E29 417 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 SEPHS2Q99611 448 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 C17orf80Q9BSJ5 609 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 DGCR6LQ9BY27 220 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 CEP44Q9C0F1 390 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 SIK2Q9H0K1 926 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 EBF2Q9HAK2 575 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 HMG20AQ9NP66 347 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 MYO3AQ8NEV4 1616 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 ALDH1B1P30837 517 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 PPATQ06203 517 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 FAM98CQ17RN3 349 aaKnown RBP13.09□□□□□ -0.31
GPC4-201ENST00000370828 CNPY1Q3B7I2 92 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 C16orf46Q6P387 395 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 PODNQ7Z5L7 613 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 HACE1Q8IYU2 909 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 C6orf62Q9GZU0 229 aaPredicted RBP13.09□□□□□ -0.31
GPC4-201ENST00000370828 CYP4F12Q9HCS2 524 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 BLOC1S4Q9NUP1 217 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 TRNAU1APQ9NX07 287 aaKnown RBP13.09□□□□□ -0.31
GPC4-201ENST00000370828 STAP1Q9ULZ2 295 aa13.09□□□□□ -0.31
GPC4-201ENST00000370828 PREX2Q70Z35 1606 aa13.08□□□□□ -0.31
GPC4-201ENST00000370828 PTGES3LE9PB15 166 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 ETS1P14921 441 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 ATP6V1B2P21281 511 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 CLCN2P51788 898 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 DENND1BQ6P3S1 775 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 DEPDC7Q96QD5 511 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 EGFL8Q99944 293 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 DMTF1Q9Y222 760 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 UNC13BO14795 1591 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 UMODL1Q5DID0 1318 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 CAPN8A6NHC0 703 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 STMND1H3BQB6 276 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 EIF2B5Q13144 721 aaKnown RBP13.08□□□□□ -0.32
GPC4-201ENST00000370828 GPR107Q5VW38 600 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 POLNQ7Z5Q5 900 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 SPATA20Q8TB22 786 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 ZNF398Q8TD17 642 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 ERLEC1Q96DZ1 483 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 RAVER2Q9HCJ3 691 aaKnown RBP13.08□□□□□ -0.32
GPC4-201ENST00000370828 ERVK-5Q9HDB9 667 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 TDRKHQ9Y2W6 561 aaKnown RBP13.08□□□□□ -0.32
GPC4-201ENST00000370828 C3orf70A6NLC5 250 aaPredicted RBP13.08□□□□□ -0.32
GPC4-201ENST00000370828 NR5A2O00482 541 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 GNB5O14775 395 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 C6orf222P0C671 652 aaPredicted RBP13.08□□□□□ -0.32
GPC4-201ENST00000370828 ALOX12P18054 663 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 JAK1P23458 1154 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 BST1Q10588 318 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 MMRN1Q13201 1228 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 ITGA7Q13683 1181 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 TAF2Q6P1X5 1199 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 TTC27Q6P3X3 843 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 RTKN2Q8IZC4 609 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 MAGEB5Q9BZ81 275 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 EFCAB6Q5THR3 1501 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 A0A1W2PPM1 405 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 C2orf71A6NGG8 1288 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 H0YIN7 160 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 CNOT3O75175 753 aaKnown RBP13.08□□□□□ -0.32
GPC4-201ENST00000370828 PSMC6P62333 389 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 RALGDSQ12967 914 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 DSTYKQ6XUX3 929 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 TAS1R2Q8TE23 839 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 HES6Q96HZ4 224 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 GINS4Q9BRT9 223 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 C1orf50Q9BV19 199 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 POLR1BQ9H9Y6 1135 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 NSMCE4AQ9NXX6 385 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 MOSPD1Q9UJG1 213 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 SLC12A4Q9UP95 1085 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 ADGRA2Q96PE1 1338 aa13.08□□□□□ -0.32
GPC4-201ENST00000370828 TRMUO75648 421 aaKnown RBP13.07□□□□□ -0.32
GPC4-201ENST00000370828 SUPT7LO94864 414 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 CHRNB3Q05901 458 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 MFSD7Q6UXD7 560 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 RNF19BQ6ZMZ0 732 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 KCNK18Q7Z418 384 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 PIGWQ7Z7B1 504 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 SATL1Q86VE3 508 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 ARHGEF19Q8IW93 802 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 DHRSXQ8N5I4 330 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 RBM46Q8TBY0 533 aaKnown RBP13.07□□□□□ -0.32
GPC4-201ENST00000370828 UNKQ9C0B0 810 aaKnown RBP13.07□□□□□ -0.32
GPC4-201ENST00000370828 PREBQ9HCU5 417 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 FAM49BQ9NUQ9 324 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 SLC12A6Q9UHW9 1150 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 WASF2Q9Y6W5 498 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 DFFAO00273 331 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 ZNF862O60290 1169 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 BANF1O75531 89 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 WASHC5Q12768 1159 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 GRAPQ13588 217 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 GLRA4Q5JXX5 417 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 ANO7Q6IWH7 933 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 DHFR2Q86XF0 187 aa13.07□□□□□ -0.32
GPC4-201ENST00000370828 PCDH20Q8N6Y1 951 aaKnown RBP13.07□□□□□ -0.32
GPC4-201ENST00000370828 GRAPLQ8TC17 118 aaPredicted RBP13.07□□□□□ -0.32
GPC4-201ENST00000370828 PDCD6IPQ8WUM4 868 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms