RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 ZMYND8Q9ULU4 1186 aaPredicted RBP20.29■□□□□ 0.84
CHTOP-204ENST00000368694 SLC27A5Q9Y2P5 690 aa20.29■□□□□ 0.84
CHTOP-204ENST00000368694 USP3Q9Y6I4 520 aa20.29■□□□□ 0.84
CHTOP-204ENST00000368694 M0QYT0 321 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 TNFRSF10BO14763 440 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 HEXIM1O94992 359 aaKnown RBP20.28■□□□□ 0.84
CHTOP-204ENST00000368694 KDELR1P24390 212 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 SIX1Q15475 284 aaPredicted RBP20.28■□□□□ 0.84
CHTOP-204ENST00000368694 BOLA3Q53S33 107 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 CYP4V2Q6ZWL3 525 aaPredicted RBP20.28■□□□□ 0.84
CHTOP-204ENST00000368694 BHLHA9Q7RTU4 235 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 CCDC26Q8TAB7 109 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 EDEM1Q92611 657 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 C8orf48Q96LL4 319 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 CALN1Q9BXU9 219 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 PCDHB12Q9Y5F1 795 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 SOAT2O75908 522 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 TJP3O95049 919 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 FYNP06241 537 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 OR1D2P34982 312 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 CDKN2BP42772 138 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 GLUD2P49448 558 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 CDH6P55285 790 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 VSNL1P62760 191 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 PITX1P78337 314 aaPredicted RBP20.28■□□□□ 0.84
CHTOP-204ENST00000368694 NME3Q13232 169 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 KLF1Q13351 362 aaPredicted RBP20.28■□□□□ 0.84
CHTOP-204ENST00000368694 MAATS1Q7Z4T9 603 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 NUP93Q8N1F7 819 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 SCML4Q8N228 414 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 FIBCD1Q8N539 461 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 CMASQ8NFW8 434 aaPredicted RBP20.28■□□□□ 0.84
CHTOP-204ENST00000368694 SLC7A14Q8TBB6 771 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 NPY6RQ99463 290 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 HTATIP2Q9BUP3 242 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 INSL6Q9Y581 213 aa20.28■□□□□ 0.84
CHTOP-204ENST00000368694 hCG_1818297A0A087WSY0 165 aa20.27■□□□□ 0.84
CHTOP-204ENST00000368694 WDR27A2RRH5 827 aa20.27■□□□□ 0.84
CHTOP-204ENST00000368694 C3orf70A6NLC5 250 aaPredicted RBP20.27■□□□□ 0.84
CHTOP-204ENST00000368694 ADAM12O43184 909 aa20.27■□□□□ 0.84
CHTOP-204ENST00000368694 CD48P09326 243 aa20.27■□□□□ 0.84
CHTOP-204ENST00000368694 CHRNA3P32297 505 aa20.27■□□□□ 0.84
CHTOP-204ENST00000368694 PPM1AP35813 382 aa20.27■□□□□ 0.84
CHTOP-204ENST00000368694 ROR1Q01973 937 aa20.27■□□□□ 0.84
CHTOP-204ENST00000368694 DUSP4Q13115 394 aa20.27■□□□□ 0.84
CHTOP-204ENST00000368694 KRT81Q14533 505 aa20.27■□□□□ 0.84
CHTOP-204ENST00000368694 BSPRYQ5W0U4 402 aa20.27■□□□□ 0.84
CHTOP-204ENST00000368694 SLC8B1Q6J4K2 584 aa20.27■□□□□ 0.84
CHTOP-204ENST00000368694 FAM131BQ86XD5 332 aa20.27■□□□□ 0.84
CHTOP-204ENST00000368694 C2orf15Q8WU43 125 aaKnown RBP20.27■□□□□ 0.84
CHTOP-204ENST00000368694 C1orf54Q8WWF1 131 aa20.27■□□□□ 0.84
CHTOP-204ENST00000368694 SNRNP25Q9BV90 132 aaKnown RBP20.27■□□□□ 0.84
CHTOP-204ENST00000368694 HERC2P3Q9BVR0 1158 aa20.27■□□□□ 0.84
CHTOP-204ENST00000368694 GPATCH2LQ9NWQ4 482 aa20.27■□□□□ 0.84
CHTOP-204ENST00000368694 CALCOCO1Q9P1Z2 691 aa20.27■□□□□ 0.84
CHTOP-204ENST00000368694 BACE2Q9Y5Z0 518 aa20.27■□□□□ 0.84
CHTOP-204ENST00000368694 SLC4A7Q9Y6M7 1214 aa20.27■□□□□ 0.84
CHTOP-204ENST00000368694 URODP06132 367 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 TUBBP07437 444 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 H2AFXP16104 143 aaPredicted RBP20.26■□□□□ 0.83
CHTOP-204ENST00000368694 MCM3P25205 808 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 PTPN7P35236 360 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 HTRA4P83105 476 aaPredicted RBP20.26■□□□□ 0.83
CHTOP-204ENST00000368694 DEUP1Q05D60 604 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 WDR93Q6P2C0 686 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 CCDC137Q6PK04 289 aaKnown RBP20.26■□□□□ 0.83
CHTOP-204ENST00000368694 ADAM32Q8TC27 787 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 GPR152Q8TDT2 470 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 TEKT4Q8WW24 435 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 NT5C3BQ969T7 300 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 TRIM62Q9BVG3 475 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 CRISPLD1Q9H336 500 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 RAB21Q9UL25 225 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 TTI1O43156 1089 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 DNAJB2P25686 324 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 RDXP35241 583 aaKnown RBP20.26■□□□□ 0.83
CHTOP-204ENST00000368694 DR1Q01658 176 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 DSG1Q02413 1049 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 GUCY2DQ02846 1103 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 ADCY2Q08462 1091 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 SNX1Q13596 522 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 CYP1B1Q16678 543 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 ZC3H12AQ5D1E8 599 aaKnown RBP20.26■□□□□ 0.83
CHTOP-204ENST00000368694 ERMARDQ5T6L9 678 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 OTUD1Q5VV17 481 aaPredicted RBP20.26■□□□□ 0.83
CHTOP-204ENST00000368694 DDX53Q86TM3 631 aaKnown RBP20.26■□□□□ 0.83
CHTOP-204ENST00000368694 CCDC105Q8IYK2 499 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 VPS52Q8N1B4 723 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 ATG4AQ8WYN0 398 aa20.26■□□□□ 0.83
CHTOP-204ENST00000368694 LBHD1Q9BQE6 289 aaPredicted RBP20.26■□□□□ 0.83
CHTOP-204ENST00000368694 ZNF638Q14966 1978 aaKnown RBP20.26■□□□□ 0.83
CHTOP-204ENST00000368694 MDM4O15151 490 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 VNN2O95498 520 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 YWHAGP61981 247 aaKnown RBP eCLIP20.25■□□□□ 0.83
CHTOP-204ENST00000368694 MAP7D3Q8IWC1 876 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 CCDC185Q8N715 623 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 FBXO44Q9H4M3 255 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.25■□□□□ 0.83
CHTOP-204ENST00000368694 RRN3Q9NYV6 651 aa20.25■□□□□ 0.83
CHTOP-204ENST00000368694 AP4E1Q9UPM8 1137 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms