RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 PPARDQ03181 441 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 CDK18Q07002 472 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 CYP24A1Q07973 514 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 TMED2Q15363 201 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 SMAD2Q15796 467 aaKnown RBP12.03□□□□□ -0.48
USF1-201ENST00000368019 IRGCQ6NXR0 463 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 CENPUQ71F23 418 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 CMTR2Q8IYT2 770 aaKnown RBP12.03□□□□□ -0.48
USF1-201ENST00000368019 GPD1LQ8N335 351 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 ZFAND2BQ8WV99 257 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 TRAPPC12Q8WVT3 735 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 NKD2Q969F2 451 aaPredicted RBP12.03□□□□□ -0.48
USF1-201ENST00000368019 BTBD6Q96KE9 485 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 SH3GL3Q99963 347 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 DHRS4Q9BTZ2 278 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 CCDC28BQ9BUN5 200 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 FTHL17Q9BXU8 183 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 VPS11Q9H270 941 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 PCDH9Q9HC56 1237 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 AGO4Q9HCK5 861 aaKnown RBP12.03□□□□□ -0.48
USF1-201ENST00000368019 C1orf112Q9NSG2 853 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 PSMC3IPQ9P2W1 217 aaPredicted RBP12.03□□□□□ -0.48
USF1-201ENST00000368019 IP6K2Q9UHH9 426 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 PADI3Q9ULW8 664 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 TBX20Q9UMR3 447 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 TRPV2Q9Y5S1 764 aa12.03□□□□□ -0.48
USF1-201ENST00000368019 MRPL42Q9Y6G3 142 aaKnown RBP12.03□□□□□ -0.48
USF1-201ENST00000368019 SMIM35A0A1B0GVV1 85 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 A8MUI8 341 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 MBTPS2O43462 519 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 LIASO43766 372 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 TBX10O75333 385 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 TJP3O95049 919 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 ITGAVP06756 1048 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 T-ENOLP0DO92 83 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 DNAJB1P25685 340 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 STAT5BP51692 787 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 PSMC5P62195 406 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 OCRLQ01968 901 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 ADAM15Q13444 863 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 SNX1Q13596 522 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 KLHL38Q2WGJ6 581 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 EP400NLQ6ZTU2 488 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 CHSY1Q86X52 802 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 CPNE8Q86YQ8 564 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 CBWD2Q8IUF1 395 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 NPAS4Q8IUM7 802 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 NME8Q8N427 588 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 ALLCQ8N6M5 410 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 RBBP8NLQ8NC74 664 aaPredicted RBP12.02□□□□□ -0.49
USF1-201ENST00000368019 TMEM161BQ8NDZ6 487 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 SPPL3Q8TCT6 385 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 MICAL1Q8TDZ2 1067 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 HERPUD2Q9BSE4 406 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 TBC1D10AQ9BXI6 508 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 OSBPL1AQ9BXW6 950 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 FAM49AQ9H0Q0 323 aaPredicted RBP12.02□□□□□ -0.49
USF1-201ENST00000368019 ALG13Q9NP73 1137 aaKnown RBP12.02□□□□□ -0.49
USF1-201ENST00000368019 DDX56Q9NY93 547 aaKnown RBP12.02□□□□□ -0.49
USF1-201ENST00000368019 POLIQ9UNA4 740 aa12.02□□□□□ -0.49
USF1-201ENST00000368019 LRRD1A4D1F6 860 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 LINC01565O15544 149 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 CCDC22O60826 627 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 CCNE2O96020 404 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 ITGB1P05556 798 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 GSTA2P09210 222 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 YWHABP31946 246 aaKnown RBP12.01□□□□□ -0.49
USF1-201ENST00000368019 IRS1P35568 1242 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 ABL2P42684 1182 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 RAD23BP54727 409 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 NOMO3P69849 1222 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 KRT76Q01546 638 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 TMEM62Q0P6H9 643 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 DMP1Q13316 513 aaPredicted RBP12.01□□□□□ -0.49
USF1-201ENST00000368019 KRT72Q14CN4 511 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 P3H1Q32P28 736 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 HHATQ5VTY9 493 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 MTHFD1LQ6UB35 978 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 FAM43BQ6ZT52 329 aaPredicted RBP12.01□□□□□ -0.49
USF1-201ENST00000368019 SV2AQ7L0J3 742 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 NLRP9Q7RTR0 991 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 FEZF2Q8TBJ5 459 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 TAS1R2Q8TE23 839 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 ATG4AQ8WYN0 398 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 MSLNLQ96KJ4 702 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 C9orf72Q96LT7 481 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 NUDCD1Q96RS6 583 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 VCXQ9H320 206 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 SAYSD1Q9NPB0 183 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 ANKFY1Q9P2R3 1169 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 GGT7Q9UJ14 662 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 ZFP69BQ9UJL9 534 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 R3HDM2Q9Y2K5 976 aaKnown RBP12.01□□□□□ -0.49
USF1-201ENST00000368019 LRCH1Q9Y2L9 728 aa12.01□□□□□ -0.49
USF1-201ENST00000368019 A8MXQ7 604 aa12□□□□□ -0.49
USF1-201ENST00000368019 E7ESA3 106 aa12□□□□□ -0.49
USF1-201ENST00000368019 STAG3L1P0CL83 205 aa12□□□□□ -0.49
USF1-201ENST00000368019 NEFHP12036 1026 aa12□□□□□ -0.49
USF1-201ENST00000368019 IBSPP21815 317 aaPredicted RBP12□□□□□ -0.49
USF1-201ENST00000368019 CA4P22748 312 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms