RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 CNTNAP5Q8WYK1 1306 aa16.18■□□□□ 0.18
NUCKS1-201ENST00000367142 SEZ6Q53EL9 994 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 FAXCQ5TGI0 409 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 BARGINQ6ZT62 677 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 STOX1Q6ZVD7 989 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 LPCAT1Q8NF37 534 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 FBXO44Q9H4M3 255 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 POLR1DQ9Y2S0 133 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 ZNF521Q96K83 1311 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 NTSR2O95665 410 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 PPP1R10Q96QC0 940 aaKnown RBP16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 CNPY3Q9BT09 278 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 CNTNAP2Q9UHC6 1331 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 COMMD2Q86X83 199 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 ST13P5Q8NFI4 369 aaPredicted RBP16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 TMEM159Q96B96 161 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 REPS1Q96D71 796 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 MED8Q96G25 268 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 RBM12Q9NTZ6 932 aaKnown RBP16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 AP4E1Q9UPM8 1137 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 ERN1O75460 977 aaKnown RBP16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 THRAP10827 490 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 ZNF23P17027 643 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 ILF2Q12905 390 aaKnown RBP16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 WDR49Q8IV35 697 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 CCDC189A1A4V9 331 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 SMIM22K7EJ46 135 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 PQBP1O60828 265 aaKnown RBP16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 KLRC1P26715 233 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 POU1F1P28069 291 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 RAB14P61106 215 aa16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 FMR1Q06787 632 aaKnown RBP eCLIP16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 DNAJC1Q96KC8 554 aaKnown RBP16.17■□□□□ 0.18
NUCKS1-201ENST00000367142 CASTOR2A6NHX0 329 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 ALDH9A1P49189 494 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 SLC45A4Q5BKX6 768 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 MOSPD2Q8NHP6 518 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 USP7Q93009 1102 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 ATXN3LQ9H3M9 355 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 SNX8Q9Y5X2 465 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 TULP4Q9NRJ4 1543 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 MANSC4A6NHS7 340 aaPredicted RBP16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 PHF20L1A8MW92 1017 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 RBAK-RBAKDNI3L0D1 243 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 ENO2P09104 434 aaPredicted RBP16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 USP38Q8NB14 1042 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 SPG21Q9NZD8 308 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 FAM220BPB1ANY3 271 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 ZNF682O95780 498 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 FEN1P39748 380 aaKnown RBP16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 MMRN1Q13201 1228 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 FNDC3BQ53EP0 1204 aaKnown RBP16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 IFNLR1Q8IU57 520 aaPredicted RBP16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 USP6NLQ92738 828 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 ISCUQ9H1K1 167 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 EPC1Q9H2F5 836 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 CYP3A43Q9HB55 503 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 ITGA11Q9UKX5 1188 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 HOXC6P09630 235 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 CNTFP26441 200 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 SERPINB3P29508 390 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 SCNN1BP51168 640 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 ACOX1Q15067 660 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 DTNBP1Q96EV8 351 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 SPACA7Q96KW9 195 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 RUSC1Q9BVN2 902 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 TRIT1Q9H3H1 467 aaKnown RBP16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 TDRKHQ9Y2W6 561 aaKnown RBP16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 RAP1GAPP47736 663 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 MTM1Q13496 603 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 GNA13Q14344 377 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 CCDC92Q53HC0 331 aaPredicted RBP16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 SLC22A9Q8IVM8 553 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 DAGLBQ8NCG7 672 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 ZSWIM1Q9BR11 485 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 ACTR8Q9H981 624 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 SESN1Q9Y6P5 492 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 ABCC3O15438 1527 aa16.16■□□□□ 0.18
NUCKS1-201ENST00000367142 A0A088AWK7 358 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 CARNS1A5YM72 827 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 ZNF10P21506 573 aaPredicted RBP16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 TKTL1P51854 596 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 SLC13A5Q86YT5 568 aaPredicted RBP16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 DPF2Q92785 391 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 WDR24Q96S15 920 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 NAT9Q9BTE0 207 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 IGFLR1Q9H665 355 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 TMEM114B3SHH9 223 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 NCAM2O15394 837 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 IGSF6O95976 241 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 MAD2L1Q13257 205 aaPredicted RBP16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 GJB7Q6PEY0 223 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 SH3GL2Q99962 352 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 GPAMQ9HCL2 828 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 RGS5O15539 181 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 NUDT14O95848 222 aa16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 TFE3P19532 575 aaPredicted RBP16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 MKRN4PQ13434 485 aaPredicted RBP16.15■□□□□ 0.18
NUCKS1-201ENST00000367142 TRPM8Q7Z2W7 1104 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms