RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 ASAP1Q9ULH1 1129 aa4.87□□□□□ -1.63
RNU6-553P-201ENST00000364047 BTBD3Q9Y2F9 522 aa4.87□□□□□ -1.63
RNU6-553P-201ENST00000364047 KAT6AQ92794 2004 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 POM121BA6NF01 834 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 RNF8O76064 485 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 ADRA1DP25100 572 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 COPAP53621 1224 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 DEUP1Q05D60 604 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 ZNF543Q08ER8 600 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 KCNB1Q14721 858 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 CLCA4Q14CN2 919 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 LARS2Q15031 903 aaKnown RBP4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 ETFDHQ16134 617 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 TMEM63BQ5T3F8 832 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 KLHDC7AQ5VTJ3 777 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 PAPD7Q5XG87 772 aaKnown RBP4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 ZNF425Q6IV72 752 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 ZNF813Q6ZN06 617 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 FSTL5Q8N475 847 aaPredicted RBP4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 CCDC33Q8N5R6 958 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 PNPLA1Q8N8W4 532 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 ATP11CQ8NB49 1132 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 SCARB1Q8WTV0 552 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 FAM118BQ9BPY3 351 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 SLC25A32Q9H2D1 315 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 SCAF8Q9UPN6 1271 aaKnown RBP4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 FER1L4A9Z1Z3 1794 aa4.86□□□□□ -1.63
RNU6-553P-201ENST00000364047 CYP2D7A0A087X1C5 515 aa4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 TP73O15350 636 aa4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 TMEM225BP0DP42 221 aa4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 SFPQP23246 707 aaKnown RBP eCLIP4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 TXNL4AP83876 142 aaKnown RBP4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 DAZAP2Q15038 168 aaPredicted RBP4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 COBLL1Q53SF7 1204 aa4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 LRCH2Q5VUJ6 765 aa4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 KRT28Q7Z3Y7 464 aa4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 CCAR1Q8IX12 1150 aaKnown RBP4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 C12orf76Q8N812 135 aaPredicted RBP4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 MBD3L2Q8NHZ7 208 aaPredicted RBP4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 DENND1AQ8TEH3 1009 aa4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 PNISRQ8TF01 805 aaKnown RBP4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 LRRC46Q96FV0 321 aa4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 C8orf48Q96LL4 319 aa4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 FAM227BQ96M60 508 aa4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 SELENOOQ9BVL4 669 aa4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 SARGQ9BW04 601 aa4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 USP29Q9HBJ7 922 aa4.85□□□□□ -1.63
RNU6-553P-201ENST00000364047 COL15A1P39059 1388 aa4.84□□□□□ -1.63
RNU6-553P-201ENST00000364047 DSCR3O14972 297 aa4.84□□□□□ -1.63
RNU6-553P-201ENST00000364047 BCAR3O75815 825 aa4.84□□□□□ -1.63
RNU6-553P-201ENST00000364047 SLC5A1P13866 664 aa4.84□□□□□ -1.63
RNU6-553P-201ENST00000364047 TSHRP16473 764 aa4.84□□□□□ -1.63
RNU6-553P-201ENST00000364047 FGFR2P21802 821 aa4.84□□□□□ -1.63
RNU6-553P-201ENST00000364047 ATICP31939 592 aa4.84□□□□□ -1.63
RNU6-553P-201ENST00000364047 HTR7P34969 479 aa4.84□□□□□ -1.63
RNU6-553P-201ENST00000364047 MMP13P45452 471 aa4.84□□□□□ -1.63
RNU6-553P-201ENST00000364047 CASP5P51878 434 aa4.84□□□□□ -1.63
RNU6-553P-201ENST00000364047 CFHR3Q02985 330 aa4.84□□□□□ -1.63
RNU6-553P-201ENST00000364047 MFSD13AQ14CX5 517 aa4.84□□□□□ -1.63
RNU6-553P-201ENST00000364047 CC2D1BQ5T0F9 858 aaKnown RBP4.84□□□□□ -1.63
RNU6-553P-201ENST00000364047 VSTM1Q6UX27 236 aa4.84□□□□□ -1.63
RNU6-553P-201ENST00000364047 RANBP10Q6VN20 620 aa4.84□□□□□ -1.63
RNU6-553P-201ENST00000364047 P3H2Q8IVL5 708 aa4.84□□□□□ -1.63
RNU6-553P-201ENST00000364047 OSR1Q8TAX0 266 aaPredicted RBP4.84□□□□□ -1.63
RNU6-553P-201ENST00000364047 EDC3Q96F86 508 aaKnown RBP4.84□□□□□ -1.63
RNU6-553P-201ENST00000364047 A0A087WZ62 844 aa4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 CLCA1A8K7I4 914 aa4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 H3BNC9 293 aa4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 CLIC1O00299 241 aa4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 KIF3BO15066 747 aa4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 CA12O43570 354 aa4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 WDR47O94967 919 aa4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 ATF7P17544 494 aaPredicted RBP4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 ATP5F1P24539 256 aaPredicted RBP4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 PRIM2P49643 509 aa4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 GPC5P78333 572 aa4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 GPS1Q13098 491 aa4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 HNRNPA0Q13151 305 aaKnown RBP4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 SAFBQ15424 915 aaKnown RBP eCLIP4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 C11orf87Q6NUJ2 197 aa4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 CRTC1Q6UUV9 634 aa4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 FAM71DQ8N9W8 422 aa4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 PRSS3P2Q8NHM4 247 aa4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 ZNF398Q8TD17 642 aa4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 TBCBQ99426 244 aa4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 MAGEB5Q9BZ81 275 aa4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 GAR1Q9NY12 217 aaKnown RBP4.83□□□□□ -1.64
RNU6-553P-201ENST00000364047 E5RJQ4 531 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 FCHO1O14526 889 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 APAF1O14727 1248 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 AREL1O15033 823 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 FYB1O15117 783 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 PMM2O15305 246 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 PRAMEF2O60811 474 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 TOP3BO95985 862 aaKnown RBP4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 PTGER1P34995 402 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 STT3AP46977 705 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 KRTAP1-1Q07627 177 aa4.82□□□□□ -1.64
RNU6-553P-201ENST00000364047 CCDC15Q0P6D6 951 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms