RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 ANXA1P04083 346 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 TOB1P50616 345 aaPredicted RBP0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 SLC8A3P57103 927 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 ADRM1Q16186 407 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 SMTNL2Q2TAL5 461 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 PIK3CD-AS1Q5SR53 167 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 SWSAP1Q6NVH7 229 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 Q6ZTK2 550 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 FRMD7Q6ZUT3 714 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 AOPEPQ8N6M6 819 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 SIRT6Q8N6T7 355 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 ZNF610Q8N9Z0 462 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 LILRB1Q8NHL6 650 aaPredicted RBP0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 DDX55Q8NHQ9 600 aaKnown RBP eCLIP0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 HNRNPLLQ8WVV9 542 aaKnown RBP0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 SOCS4Q8WXH5 440 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 CD101Q93033 1021 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 ZNF689Q96CS4 500 aaPredicted RBP0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 SNX27Q96L92 541 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 HS6ST2Q96MM7 605 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 FIZ1Q96SL8 496 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 TRIM15Q9C019 465 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 IL25Q9H293 177 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 TRIM39Q9HCM9 518 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 PAPOLBQ9NRJ5 636 aaKnown RBP0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 DLGAP2Q9P1A6 1054 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 LPAR3Q9UBY5 353 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 PFDN2Q9UHV9 154 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 MUC16Q8WXI7 14507 aa0.24□□□□□ -2.37
RNU6-340P-201ENST00000364005 TENM3Q9P273 2699 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 SOS1Q07889 1333 aaPredicted RBP0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 FRMPD2Q68DX3 1309 aaPredicted RBP0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 IGLV3-10A0A075B6K4 115 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 SLC22A23A1A5C7 686 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 PRAC2D3DTV9 90 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 CES2O00748 559 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 NEMP1O14524 444 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 SLC22A3O75751 556 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 SORBS2O94875 1100 aaKnown RBP0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 CRYAAP02489 173 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 CYP1A2P05177 515 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 GATA2P23769 480 aaPredicted RBP0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 ITGB8P26012 769 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 LSP1P33241 339 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 TIMP3P35625 211 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 RFX5P48382 616 aaPredicted RBP0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 HK3P52790 923 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 TUBA1BP68363 451 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 IRX1P78414 480 aaPredicted RBP0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 SSRP1Q08945 709 aaKnown RBP0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 TRAF2Q12933 501 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 TBX2Q13207 712 aaPredicted RBP0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 RIGQ13278 110 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 PPIGQ13427 754 aaKnown RBP eCLIP0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 HDAC1Q13547 482 aaPredicted RBP0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 PLCB4Q15147 1175 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 PFKFB3Q16875 520 aaPredicted RBP0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 MUM1L1Q5H9M0 696 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 TMEM63BQ5T3F8 832 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 DCAF12L1Q5VU92 463 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 FAM166AQ6J272 317 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 NHLRC1Q6VVB1 395 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 SND1Q7KZF4 910 aaKnown RBP eCLIP0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 METTL16Q86W50 562 aaKnown RBP0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 NAGSQ8N159 534 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 LINC01465Q8N7H1 131 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 EFHBQ8N7U6 833 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 ADAD2Q8NCV1 583 aaKnown RBP0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 CADM4Q8NFZ8 388 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 FAM76AQ8TAV0 307 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 DEPTORQ8TB45 409 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 GIPC2Q8TF65 315 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 TSPEARQ8WU66 669 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 USP13Q92995 863 aaPredicted RBP0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 SCAMP4Q969E2 229 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 FATE1Q969F0 183 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 RUNDC1Q96C34 613 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 EAF2Q96CJ1 260 aaPredicted RBP0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 IL17FQ96PD4 163 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 IFT57Q9NWB7 429 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 OCIAD1Q9NX40 245 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 GAR1Q9NY12 217 aaKnown RBP0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 FZD10Q9ULW2 581 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 INPP5FQ9Y2H2 1132 aa0.23□□□□□ -2.37
RNU6-340P-201ENST00000364005 A0A0J9YWU9 116 aa0.22□□□□□ -2.37
RNU6-340P-201ENST00000364005 PYCARD-AS1I3L0S3 204 aa0.22□□□□□ -2.37
RNU6-340P-201ENST00000364005 TULP2O00295 520 aa0.22□□□□□ -2.37
RNU6-340P-201ENST00000364005 CLIC1O00299 241 aa0.22□□□□□ -2.37
RNU6-340P-201ENST00000364005 RRHO14718 337 aa0.22□□□□□ -2.37
RNU6-340P-201ENST00000364005 KDM1AO60341 852 aa0.22□□□□□ -2.37
RNU6-340P-201ENST00000364005 IFNA2P01563 188 aa0.22□□□□□ -2.37
RNU6-340P-201ENST00000364005 LCATP04180 440 aa0.22□□□□□ -2.37
RNU6-340P-201ENST00000364005 PRKCSHP14314 528 aaPredicted RBP0.22□□□□□ -2.37
RNU6-340P-201ENST00000364005 DAOP14920 347 aa0.22□□□□□ -2.37
RNU6-340P-201ENST00000364005 HOXA7P31268 230 aaPredicted RBP0.22□□□□□ -2.37
RNU6-340P-201ENST00000364005 IGFALSP35858 605 aa0.22□□□□□ -2.37
RNU6-340P-201ENST00000364005 DIO1P49895 249 aa0.22□□□□□ -2.37
RNU6-340P-201ENST00000364005 GYS2P54840 703 aa0.22□□□□□ -2.37
RNU6-340P-201ENST00000364005 SLC12A2P55011 1212 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms