RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 EXOSC4Q9NPD3 245 aaKnown RBP11.3□□□□□ -0.6
CLIP1-203ENST00000361654 ASAH2Q9NR71 780 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 PCDHB9Q9Y5E1 797 aa11.3□□□□□ -0.6
CLIP1-203ENST00000361654 NFASCO94856 1347 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 ADM5C9JUS6 153 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 LUZP2Q86TE4 346 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 SLC44A2Q8IWA5 706 aaPredicted RBP11.29□□□□□ -0.6
CLIP1-203ENST00000361654 LZTR1Q8N653 840 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 TMEM176AQ96HP8 235 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 TRIT1Q9H3H1 467 aaKnown RBP11.29□□□□□ -0.6
CLIP1-203ENST00000361654 NT5MQ9NPB1 228 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 ATP6V1HQ9UI12 483 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 ADGRB3O60242 1522 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 CNTNAP5Q8WYK1 1306 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 CNPP09543 421 aaKnown RBP11.29□□□□□ -0.6
CLIP1-203ENST00000361654 UQCRBP14927 111 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 ZNF24P17028 368 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 ZNF7P17097 686 aaPredicted RBP11.29□□□□□ -0.6
CLIP1-203ENST00000361654 LRRC14Q15048 493 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 AP1ARQ63HQ0 302 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 IFNLR1Q8IU57 520 aaPredicted RBP11.29□□□□□ -0.6
CLIP1-203ENST00000361654 SYTL5Q8TDW5 730 aaPredicted RBP11.29□□□□□ -0.6
CLIP1-203ENST00000361654 FAM172AQ8WUF8 416 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 UROC1Q96N76 676 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 CNPY3Q9BT09 278 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 SNTG2Q9NY99 539 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 USE1Q9NZ43 259 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 STK39Q9UEW8 545 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 POLR1DQ9Y2S0 133 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 SNCAIPQ9Y6H5 919 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 ALKQ9UM73 1620 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 TET3O43151 1660 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 SLC15A5A6NIM6 579 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 CYP7B1O75881 506 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 RBP1P09455 135 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 PYGMP11217 842 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 STX5Q13190 355 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 LPCAT1Q8NF37 534 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 INPP5DQ92835 1189 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 SERAC1Q96JX3 654 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 SDR42E2A6NKP2 422 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 DEAF1O75398 565 aaPredicted RBP11.29□□□□□ -0.6
CLIP1-203ENST00000361654 LSM8O95777 96 aaKnown RBP11.29□□□□□ -0.6
CLIP1-203ENST00000361654 KRT6AP02538 564 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 KRT6BP04259 564 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 CLTBP09497 229 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 MAGEA4P43358 317 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 KRT6CP48668 564 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 ANGPT1Q15389 498 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 TUBGCP3Q96CW5 907 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 P2RX7Q99572 595 aaKnown RBP11.29□□□□□ -0.6
CLIP1-203ENST00000361654 ABCG4Q9H172 646 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 ASB7Q9H672 318 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 ACTR8Q9H981 624 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 AASDHPPTQ9NRN7 309 aa11.29□□□□□ -0.6
CLIP1-203ENST00000361654 SMIM22K7EJ46 135 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 TK2O00142 265 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 C21orf59P57076 290 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 KDSRQ06136 332 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 BCL2L1Q07817 233 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 STK4Q13043 487 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 CYP51A1Q16850 503 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 SETMARQ53H47 684 aaPredicted RBP11.28□□□□□ -0.6
CLIP1-203ENST00000361654 FBXW10Q5XX13 1052 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 LVRNQ6Q4G3 990 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 COLGALT2Q8IYK4 626 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 CXorf40AQ8TE69 158 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 ANKRD49Q8WVL7 239 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 DEPDC7Q96QD5 511 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 MIR1-1HGQ9H1L0 117 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 RGS18Q9NS28 235 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 AP4E1Q9UPM8 1137 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 ENO2P09104 434 aaPredicted RBP11.28□□□□□ -0.6
CLIP1-203ENST00000361654 MYBL2P10244 700 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 TOMM20Q15388 145 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 SEZ6Q53EL9 994 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 KLHDC7AQ5VTJ3 777 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 TMEM86AQ8N2M4 240 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 C9orf72Q96LT7 481 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 SERPINB12Q96P63 405 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 SH3GL1Q99961 368 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 ADAM2Q99965 735 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 FHDC1Q9C0D6 1143 aaPredicted RBP11.28□□□□□ -0.6
CLIP1-203ENST00000361654 ZCWPW1Q9H0M4 648 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 SOHLH2Q9NX45 425 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 TRPC4Q9UBN4 977 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 MEI4A8MW99 385 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 NUDT14O95848 222 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 HTR1BP28222 390 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 OR1E1P30953 314 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 CLK3P49761 638 aaKnown RBP11.28□□□□□ -0.6
CLIP1-203ENST00000361654 TCEA2Q15560 299 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 SHROOM1Q2M3G4 852 aaPredicted RBP11.28□□□□□ -0.6
CLIP1-203ENST00000361654 ZDHHC17Q8IUH5 632 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 DPP10Q8N608 796 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 SPATA4Q8NEY3 305 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 PANX3Q96QZ0 392 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 FICDQ9BVA6 458 aa11.28□□□□□ -0.6
CLIP1-203ENST00000361654 SPATS2LQ9NUQ6 558 aaKnown RBP11.28□□□□□ -0.6
CLIP1-203ENST00000361654 CFAP73A6NFT4 308 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms