RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 FRMD8P1Q9BZ68 369 aaPredicted RBP12.59□□□□□ -0.39
CCDC144A-204ENST00000360524 FAM129AQ9BZQ8 928 aa12.59□□□□□ -0.39
CCDC144A-204ENST00000360524 ILKAPQ9H0C8 392 aaPredicted RBP12.59□□□□□ -0.39
CCDC144A-204ENST00000360524 PABPC3Q9H361 631 aaKnown RBP12.59□□□□□ -0.39
CCDC144A-204ENST00000360524 KPNA4O00629 521 aaPredicted RBP12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 GEMP55040 296 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 AQP5P55064 265 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 SETD3Q86TU7 594 aaPredicted RBP12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 CDH24Q86UP0 819 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 TNIP2Q8NFZ5 429 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 TMEM169Q96HH4 297 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 SEMA6BQ9H3T3 888 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 NOL6Q9H6R4 1146 aaKnown RBP12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 DNAJC16Q9Y2G8 782 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 LRCH1Q9Y2L9 728 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 E9PBE3 544 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 KLHL41O60662 606 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 CDC25CP30307 473 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 SLC47A2Q86VL8 602 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 ST13P5Q8NFI4 369 aaPredicted RBP12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 SLC20A1Q8WUM9 679 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 WDR60Q8WVS4 1066 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 USP13Q92995 863 aaPredicted RBP12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 RPS6KL1Q9Y6S9 549 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 TMEM191CA6NGB0 347 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 MEI4A8MW99 385 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 ZC3H11AO75152 810 aaKnown RBP eCLIP12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 EGFRP00533 1210 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 GSNP06396 782 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 ATP4AP20648 1035 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 EPHX2P34913 555 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 CENPLQ8N0S6 344 aaPredicted RBP12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 CHST12Q9NRB3 414 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 MRGBPQ9NV56 204 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 CRLS1Q9UJA2 301 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 C2CD2Q9Y426 696 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 HEATR9A2RTY3 570 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 CYB561D2O14569 222 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 HOXA2O43364 376 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 VTNP04004 478 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 PYGMP11217 842 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 FNTAP49354 379 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 FAM83EQ2M2I3 478 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 ACOT1Q86TX2 421 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 APOL2Q9BQE5 337 aa12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 AGO4Q9HCK5 861 aaKnown RBP12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 CEP170BQ9Y4F5 1589 aaPredicted RBP12.58□□□□□ -0.4
CCDC144A-204ENST00000360524 NR5A2O00482 541 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 ACO1P21399 889 aaKnown RBP12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 FGFR2P21802 821 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 DDX39BQ13838 428 aaKnown RBP12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 EFL1Q7Z2Z2 1120 aaKnown RBP12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 BNIPLQ7Z465 357 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 SLC44A2Q8IWA5 706 aaPredicted RBP12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 ADGRF2Q8IZF7 708 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 SIX5Q8N196 739 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 ZSWIM2Q8NEG5 633 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 SOX13Q9UN79 622 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 VPS9D1Q9Y2B5 631 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 F5H5T6 163 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 B3GAT3O94766 335 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 DDHD2O94830 711 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 TAL1P17542 331 aaPredicted RBP12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 YY1P25490 414 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 STIP1P31948 543 aaKnown RBP12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 TXNRD3Q86VQ6 643 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 ATP8B4Q8TF62 1192 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 RPRD1AQ96P16 312 aaPredicted RBP12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 SRPK1Q96SB4 655 aaKnown RBP12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 CDC42EP4Q9H3Q1 356 aaKnown RBP12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 DCDC2Q9UHG0 476 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 ADGRA3Q8IWK6 1321 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 EVPLLA8MZ36 301 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 ENDOD1O94919 500 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 MFN2O95140 757 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 PBLDP30039 288 aaPredicted RBP12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 NCALDP61601 193 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 UGT3A1Q6NUS8 523 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 PAFAH2Q99487 392 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 CYLDQ9NQC7 956 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 CACNA2D2Q9NY47 1150 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 C6orf203Q9P0P8 240 aaPredicted RBP12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 C1orf232A0A0U1RR37 186 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 KRT87PA6NCN2 255 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 MLNP12872 115 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 PTPN4P29074 926 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 RFX3P48380 749 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 SLC26A2P50443 739 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 BMPR2Q13873 1038 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 TRIP4Q15650 581 aaPredicted RBP12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 LRRN4CLQ8ND94 238 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 ZFP42Q96MM3 310 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 RBBP8Q99708 897 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 RXFP1Q9HBX9 757 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 POLE3Q9NRF9 147 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 ATAD3AQ9NVI7 634 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 TRMT6Q9UJA5 497 aaKnown RBP12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 DDTLA6NHG4 134 aaPredicted RBP12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 DCDC2CA8MYV0 355 aa12.57□□□□□ -0.4
CCDC144A-204ENST00000360524 VWA5AO00534 786 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms