RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 Q96MT0 163 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 ARAP3Q8WWN8 1544 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 CCDC154A6NI56 674 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 USP17L15C9J2P7 530 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.56□□□□□ -0.88
VPS13A-203ENST00000360280 USP17L13C9JLJ4 530 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 USP17L11C9JVI0 530 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 USP17L18D6R9N7 530 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 USP17L22D6RA61 530 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 USP17L17D6RBQ6 530 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 USP17L19D6RCP7 530 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 USP17L20D6RJB6 530 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 LDLRP01130 860 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 PRR29P0C7W0 189 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 USP17L24Q0WX57 530 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 WASHC2DQ5SRD0 308 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 USP17L6PQ6QN14 398 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 PROSER1Q86XN7 944 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 PFDN2Q9UHV9 154 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 RUVBL2Q9Y230 463 aaKnown RBP9.56□□□□□ -0.88
VPS13A-203ENST00000360280 WBP11Q9Y2W2 641 aaKnown RBP9.56□□□□□ -0.88
VPS13A-203ENST00000360280 IGSF9BQ9UPX0 1349 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 PER1O15534 1290 aaPredicted RBP9.56□□□□□ -0.88
VPS13A-203ENST00000360280 KPNA6O60684 536 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 EYA4O95677 639 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 HPS3Q969F9 1004 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 ARHGEF5Q12774 1597 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 APBA3O96018 575 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 CBFBQ13951 182 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 GNA13Q14344 377 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 ARHGAP27Q6ZUM4 889 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 ZNF512Q96ME7 567 aaPredicted RBP9.56□□□□□ -0.88
VPS13A-203ENST00000360280 MYL4P12829 197 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 BAG6P46379 1132 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 RPL19P84098 196 aaKnown RBP9.56□□□□□ -0.88
VPS13A-203ENST00000360280 RUNDC3AQ59EK9 446 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 MTDHQ86UE4 582 aaKnown RBP9.56□□□□□ -0.88
VPS13A-203ENST00000360280 GDPD5Q8WTR4 605 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 EEF1AKMT1Q8WVE0 214 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 ANKS1AQ92625 1134 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 ELOVL6Q9H5J4 265 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 RBP3P10745 1247 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 NMRK2Q9NPI5 230 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 AVPR1AP37288 418 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 MTF1Q14872 753 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 DLG3Q92796 817 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 POLR1DQ9Y2S0 133 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 PPP2R3BQ9Y5P8 575 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 AFDNP55196 1824 aaKnown RBP9.56□□□□□ -0.88
VPS13A-203ENST00000360280 ZBTB22O15209 634 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 VPS4BO75351 444 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 FDX1P10109 184 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 CRKLP46109 303 aaKnown RBP9.56□□□□□ -0.88
VPS13A-203ENST00000360280 BTN3A2P78410 334 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 SLC34A1Q06495 639 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 QPRTQ15274 297 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 OLFML2AQ68BL7 652 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 C18orf25Q96B23 403 aaPredicted RBP9.56□□□□□ -0.88
VPS13A-203ENST00000360280 DCUN1D5Q9BTE7 237 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 NUDT5Q9UKK9 219 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 SNX8Q9Y5X2 465 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 NCAM1P13591 858 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 CLEC4GQ6UXB4 293 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 CLVS1Q8IUQ0 354 aaPredicted RBP9.56□□□□□ -0.88
VPS13A-203ENST00000360280 NSMCE2Q96MF7 247 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 ADGRE3Q9BY15 652 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 EPB41L4AQ9HCS5 686 aaPredicted RBP9.56□□□□□ -0.88
VPS13A-203ENST00000360280 LNPEPQ9UIQ6 1025 aa9.56□□□□□ -0.88
VPS13A-203ENST00000360280 FGRP09769 529 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 OVGP1Q12889 678 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 CHPFQ8IZ52 775 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 CHCHD6Q9BRQ6 235 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 DBNDD1Q9H9R9 158 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 A0A0B4J269 797 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 PRKAR1AP10644 381 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 TUBB3Q13509 450 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 PZPP20742 1482 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 SAMD9Q5K651 1589 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 TEX33O43247 280 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 PLA2G6O60733 806 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 MPOP05164 745 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 PDIA5Q14554 519 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 LPIN1Q14693 890 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 NEDD8Q15843 81 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 SWSAP1Q6NVH7 229 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 AKAP14Q86UN6 197 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 B3GALNT2Q8NCR0 500 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 PIN4Q9Y237 131 aaKnown RBP9.55□□□□□ -0.88
VPS13A-203ENST00000360280 KATNAL1Q9BW62 490 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 SHCBP1LQ9BZQ2 653 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 TMEM8AQ9HCN3 771 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 PDGFCQ9NRA1 345 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 ADPRHL2Q9NX46 363 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 C15orf41Q9Y2V0 281 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 HSF2Q03933 536 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 KCNMA1Q12791 1236 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 RASSF5Q8WWW0 418 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 PCDHA10Q9Y5I2 948 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 NEDD4P46934 1319 aa9.55□□□□□ -0.88
VPS13A-203ENST00000360280 FCER1AP12319 257 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms