RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 FBXO28Q9NVF7 368 aa17.81■□□□□ 0.44
CACNA1A-201ENST00000360228 KLHL28Q9NXS3 571 aa17.81■□□□□ 0.44
CACNA1A-201ENST00000360228 LSM1O15116 133 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-201ENST00000360228 SLC29A2Q14542 456 aa17.81■□□□□ 0.44
CACNA1A-201ENST00000360228 DGUOKQ16854 277 aa17.81■□□□□ 0.44
CACNA1A-201ENST00000360228 KPNA6O60684 536 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 TNNI3P19429 210 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 NUMBP49757 651 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 NT5C1AQ9BXI3 368 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 CELF4Q9BZC1 486 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 METTL5Q9NRN9 209 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 KNL1Q8NG31 2342 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 USP17L10C9JJH3 530 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 TEX33O43247 280 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 FGFR2P21802 821 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 CCR4P51679 360 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 EVPLQ92817 2033 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 RBMXL2O75526 392 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 SNX4O95219 450 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 MAPK9P45984 424 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 RAD23AP54725 363 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 KCNB1Q14721 858 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 MTF1Q14872 753 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 MIIPQ5JXC2 388 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 TCHHL1Q5QJ38 904 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 PPP1R18Q6NYC8 613 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 CYB5D1Q6P9G0 228 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 CPVLQ9H3G5 476 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 WDCPQ9H6R7 721 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 RPS6KL1Q9Y6S9 549 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 KBTBD13C9JR72 458 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 MTSS1O43312 755 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 ACADSBP45954 432 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 SV2CQ496J9 727 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 SLITRK1Q96PX8 696 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 PHTF1Q9UMS5 762 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 PDE4DIPQ5VU43 2346 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 HNRNPH1P31943 449 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 CRKP46108 304 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 ARF3P61204 181 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 ARF1P84077 181 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 STARD3Q14849 445 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 CLPBQ9H078 707 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 LYVE1Q9Y5Y7 322 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 TTLL13PA6NNM8 815 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 PLA2G6O60733 806 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 CD4P01730 458 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 OR1G1P47890 313 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 HAUS6Q7Z4H7 955 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 FOXP4Q8IVH2 680 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 MAPKBP1O60336 1514 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 RNASEH1O60930 286 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 STX11O75558 287 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 LRG1P02750 347 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 CTSHP09668 335 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 NQO1P15559 274 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 USF2Q15853 346 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 MRNIPQ6NTE8 343 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 MYO1HQ8N1T3 1032 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 ENOPH1Q9UHY7 261 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 ING4Q9UNL4 249 aa17.8■□□□□ 0.44
CACNA1A-201ENST00000360228 ANXA9O76027 345 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 RTN3O95197 1032 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 RASSF6Q6ZTQ3 369 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 RBM12Q9NTZ6 932 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 SLC38A7Q9NVC3 462 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 STAP2Q9UGK3 403 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 ACADMP11310 421 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 SPPL2AQ8TCT8 520 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 ROPN1BQ9BZX4 212 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 EPB41L4BQ9H329 900 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 ROPN1Q9HAT0 212 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 RAD51CO43502 376 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 HS6ST1O60243 411 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 OR6A2O95222 327 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 ERMARDQ5T6L9 678 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 A0A0X1KG70 313 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 SNRNP35Q16560 246 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 IZUMO2Q6UXV1 221 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 TRPV3Q8NET8 790 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 TRAPPC9Q96Q05 1148 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 BCLAF3A2AJT9 711 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 KLHL41O60662 606 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 CALB2P22676 271 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 NAA30Q147X3 362 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 R3HDM1Q15032 1099 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 CENPIQ92674 756 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 USP7Q93009 1102 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 NEUROD4Q9HD90 331 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 EHD3Q9NZN3 535 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 PHGDHO43175 533 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 CHID1Q9BWS9 393 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 DCLRE1BQ9H816 532 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 ABI2Q9NYB9 513 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 SYNMO15061 1565 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 MAP2P11137 1827 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 RPAP1Q9BWH6 1393 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 TUBA4AP68366 448 aa17.79■□□□□ 0.44
CACNA1A-201ENST00000360228 TDRD10Q5VZ19 366 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms